Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2762 ATGTCAAGGAGCAGCACACAGGCATGTGCAGCTTGTAAGTACCAACGCAGGAAGTGCGGGTCCAACTGCATTCTGGCGCCTTATTTTCCTCATGATCGCCAAAAACAGTTCCTTAATGCCCATCGTTTATTCGGGGTTGGCAAGATCACCAACATGATTAAGCCCCTCGATCAGCACCACAGAGACTTAGCCATGAGCACCCTTATCTACGAATCCGACATGCGCGCCCGTGACCCCATTGGTGGTTGCTACAGCCTCGTCCTCCAATTGCAATCTCAGATCTTTTACGCCACCCAAGAACTTCATCTTCTTCTTCAACACCTTGCTTATTTCAAATCACACCAACCTTCTTCTAATCCCTCTGACATAGTCAATAATGTCACTCCTCAGCCGCCTGACCCCCTTGAACAAACTCCACAGGAACAGCAGCAACAACAACAATGTTTTAACTACAATCTTTTGCAAGAAGATGATATCAATATGTGGGCCATTCAGAATTCTTTATCTCTTTTGTCACCCTTGTCCTTAGAGAATAACATCAATCAAGATCCTGTTGTTGATCATGGATCGCACTCTCTCTACTCCACCTAA 591 0.4569 MSRSSTQACAACKYQRRKCGSNCILAPYFPHDRQKQFLNAHRLFGVGKITNMIKPLDQHHRDLAMSTLIYESDMRARDPIGGCYSLVLQLQSQIFYATQELHLLLQHLAYFKSHQPSSNPSDIVNNVTPQPPDPLEQTPQEQQQQQQCFNYNLLQEDDINMWAIQNSLSLLSPLSLENNINQDPVVDHGSHSLYST* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2762 196 Pfam Lateral organ boundaries (LOB) domain 8 103 IPR004883 -
Gso8g2762 196 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 189 - -
Gso8g2762 196 MobiDBLite consensus disorder prediction 117 145 - -
Gso8g2762 196 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Gso8g2762 196 PANTHER LOB DOMAIN PROTEIN 3 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2762 Gso-Chr8 45378521 45379111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2762 7 165 AS2 family AT3G13850 46.961 4.05e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso8g2762 LOB 8.8e-35 No_clan