Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2758 ATGATCTCATCTCATAGTGTCTTCTATTACCATTTACCAGATCGCATTTTGCTCTTCAGAACAATGCCAGTCATCGCCGCTAAGCGCACATTGAGATCCCACCCCTCATCGCCCCCTCGCAAATCGCCCCGCCGATGCACCGCCGCAACCCCCAATTCCACTCCAACGATGAACAGATTCGGCGCCGACGAAAACCAAGCTGACCCGGAAGCTGTGAAACCCAAGTGGAATCCCAAAGACGGTGAGCAATTGAAGAGGGTGAAGCTGGCATTGCACTTGTCCACTGCGCCGGCTTCGGTCGTGTGCCGCGAGGAGGAGCAGAATGTGGTTTTGGAGTTCTGCAAGGGGTGCGTTGAGCACCAGAAGGCCGGGAGTCTATACATATGTGGCTGTCCCGGAACTGGGAAATCGTTATCTATGGAGAAAGTGAAAGACAAATTACTCATTTGGGCCAAGGAGGCAGGTCTTCCACAGCCAGATGTTTTGTCTGTAAATTGTACAACCTTTACCAACACATCAGATATTTTCACTAAGATACTTGGGTTAAACCAAACACAGGGTAAAAAGGTTTCGGCTACACCCTTACAGCAACTTCAGAACATGTATTCTCAGAAATCGTCTAACAAGAACATGACATTGATAGTAGCTGATGAGTTAGATTATTTGATAACCAAAGACAGAGGCGTGCTCCATGATCTTTTCATGCTCACCACCTTTCCTTTTTCTAGATGTATATTAATAGGTGTAGCGAATGCAATTGACCTAGCTGATCGATTTCTTCCAAGGCTTACATCACTAAATTGCAAACCTATTGTTGTAAATTTTCGGGCTTACTCTAAAGATCAGATCCTCAAGATTCTTGAAGAAAGGTTAAATGAACTTCCTTACACTGTCTTCCAACAGCAAGCCATGGAATTATGTGCTAGGAAAGTTGCTGCAGCTTCTGGTGACATGCGGAATGCTCTTTGTATATGCGGGAGGGCAATAGAGATGCTTGAAGCAGAAATTAGAGAGTCTGCCTGCAATTTGAATACTTCATTGGAAGAGATATCATCCTCCAGACAAAATCTTGCTACAGCTCCTGATTTTATGAAAAAACGAGAATTTGAGACTGTAAGGACTGATCATATGGCACGTGCCTTGTCCAAGACATATAGATCACCAGTGGTGGATACAATACAATCTCTGCCACATCATCAGCAGATTGTACTCTGCTCTTCTATGAAACATTTTCGTGGAGCCAAGAAAGATACAATCCTTGGAGAGTTGTATAAATCGTATGTGGGGGTATGCAAATCTTGTATAATTCCTCCAGCGGGAATCTTGGAATTTTCAAACATGTGCAGAGTGCTAAATGACCAGGGCCTTATTAAACTTGGACAATCTCGAGAGGATAAATTGAGAAGAGTGTCGCCTAAAGTAGATGAGGGTGATATTACTTTTGCATTGCAGGGAGTACGTTTTTTTCATAACTGTCTTTAA 1482 0.4372 MISSHSVFYYHLPDRILLFRTMPVIAAKRTLRSHPSSPPRKSPRRCTAATPNSTPTMNRFGADENQADPEAVKPKWNPKDGEQLKRVKLALHLSTAPASVVCREEEQNVVLEFCKGCVEHQKAGSLYICGCPGTGKSLSMEKVKDKLLIWAKEAGLPQPDVLSVNCTTFTNTSDIFTKILGLNQTQGKKVSATPLQQLQNMYSQKSSNKNMTLIVADELDYLITKDRGVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLTSLNCKPIVVNFRAYSKDQILKILEERLNELPYTVFQQQAMELCARKVAAASGDMRNALCICGRAIEMLEAEIRESACNLNTSLEEISSSRQNLATAPDFMKKREFETVRTDHMARALSKTYRSPVVDTIQSLPHHQQIVLCSSMKHFRGAKKDTILGELYKSYVGVCKSCIIPPAGILEFSNMCRVLNDQGLIKLGQSREDKLRRVSPKVDEGDITFALQGVRFFHNCL* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2758 493 SUPERFAMILY "Winged helix" DNA-binding domain 389 492 IPR036390 -
Gso8g2758 493 MobiDBLite consensus disorder prediction 46 61 - -
Gso8g2758 493 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 34 491 - -
Gso8g2758 493 PIRSF Cdc6 22 493 IPR016314 GO:0006270|GO:0051301
Gso8g2758 493 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 34 491 - -
Gso8g2758 493 Gene3D - 393 476 IPR036388 -
Gso8g2758 493 Pfam CDC6, C terminal winged helix domain 404 482 IPR015163 -
Gso8g2758 493 MobiDBLite consensus disorder prediction 30 78 - -
Gso8g2758 493 Coils Coil 329 349 - -
Gso8g2758 493 Gene3D - 269 392 - -
Gso8g2758 493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 338 IPR027417 -
Gso8g2758 493 Pfam AAA lid domain 298 334 IPR041083 -
Gso8g2758 493 CDD AAA 106 264 - -
Gso8g2758 493 Pfam AAA domain 121 237 IPR003593 -
Gso8g2758 493 Gene3D - 81 268 IPR027417 -
Gso8g2758 493 SMART Cdc6_C_2 404 483 IPR015163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2758 Gso-Chr8 45329372 45334895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2758 41 493 Core DNA Replication Machinery Family AT2G29680 60.173 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2758 K02213 - gmx:100791200 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0585 18 6237431 6242848 Gso8g2758 8 45329372 45334895 GST