Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2755 ATGCCACAAGAGAGCTCCCAAAACTCATTTTTTACATCTCCTTCAAAGAGAGGATTGAAGAGTTTGGTCTCCATCAACAAGGAGGCTTCATGCACTGCTGCCACAGAAGAGAGTTTCAATGATAATGAATTGGCTCAGAGGAAGGCAGAGGAAGCAGCTTTGAGAAGATACAAAGCAACAGAATGGCTACGTGAAATGGACCATGTGGCATCATCATCACTCTCTCCAACACCCTCCCAACAAGACTTTTGCCTTTCACTCCGCAATGGCCTCATTCTATGCAATGTCCTCAACAAAGTCAACCCCGGTGCTGTCCTTAAGGTGGTGGACAATCCTGGGCTTGCTGTTCAGTCTGCAGAGGGCGCGGCCCACTCTGCAATTCAGTATTTTGAGAACATGAGGAACTTTTTGGAGGCTGTTAAGGATATGCAACTTCTCACATTTGAAGCATCTGATTTGGAGAAGGGAGGTTCATCAAATAAAGTTGTGGACTGCATTCTATGTTTGAAAGGGTTTTATGAATGGAAGTTATCTGGTGGGGTTGGTGTATGGAGATATGGTGGAACTGTGAGGATCACTTCCTTTCCAAAGAAGTCTCCTTCCTCCATAGTTGGCAGTGAAAGTGCTGATGAATCATTGGATGAGCCAGAATCATCACAGTATGAACAACTGCTAGAATTTCTTCAACTATCTGAAGACTTCTTGATTGAAGAAACCAGAACTGCCAATGCTCTTGCTTTCCTTTATGATCACTTTGGACTCAGACTTCTTCAGGCTTACCTTAGAGAGGCCAATGGGATTGAAGATCTGCCTTTGAATGCAATGGTAATTGATACCTTACTCAGCAAGGTAGTCAAAGATTTCTCATCTTTGCTTGTTTCTCAAGGCAATCAGCTTGGACTTTTCCTGAAGAAAATACTAAAAGTTGATATTGGTTGTCTCTCAAAGAGAGAGTTCATAGAAGCCATCTCACTATATCTTAACCAAAGAAGTAGTTTGGCATCAAATGATTTCTCCAAATTCTGCAATTGTGGTGGAAAACGTGATAGTATTCGACAGAATGCCAATTATTCTGCAAAATATGTTGAAGTGATCAATACTCAACAGAAACAACTTGAGGGTATGAAGTACTTTTTTGAAGAGACAAAATTGGAGGTCAGACAAATTCAATCAGAATGGGAAGAAGAATTGAGTAGGCTAGAGCATCATATCAAAAGCCTTGAAGTGGCCTCCTCTTCCTACCACAAACTTTTGGAGGAGAACCGCCTTCTTTACAATCAAGTACAAGACCTCAAAGGAGCCATTAGGGTCTATTGTAGAGTAAGGCCATTCTTACCAGGACAATCAAATGGACCCTCTACAGTAGACTATATTGGAGAAAATGGAGATATGATGATTGTAAATCCCCTTAAACATGGAAAAGATGCTAGAAGGGTTTTTTCATTCAATAAGGTGTTTGGAACAAGTGTAACACAAGAACAAATTTATGCTGACACTCAATCATTGATCAGATCTGTTTTAGATGGTTATAATGTATGCATCTTTGCATACGGACAAACTGGCTCAGGGAAAACATACACAATGAGTGGCCCTGATCTGACAACTGAAGAGACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTATTTCATATATCAAAGGAAAGGGCAGGTTCCATAAAATATGAAGTTTTTGTTCAGATGATTGAAATCTACAATGAACAAGTGAGAGATTTATTAGTCAGTGATGGCTCTAACAGAAGATTAGACATACGAAACACTTCTCAATTGAATGGCATCAATGTGCCTGATGCATTTTTAGTTCCGGTTACTTGTACTCAAGATGTTCTAGACTTGATGAGAATTGGTCAGAAGAATCGTGCCGTGGGTGCTACAGCTCTAAACGAGAGAAGCAGCCGTTCTCATAGTGTTTTGACTGTTCATGTTAGAGGAAGGGAGTTAGTTTCCAACTCCATTCTTAGAGGCTGTCTTCATCTTGTGGATTTGGCTGGAAGTGAGAGGGTTGACAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAGGCTCAACATATAAATAGATCACTTTCTGCACTAGGGGATGTTATCTCTGCCTTGGCACAGAAGAGTCCACATATCCCTTATAGAAATAGCAAGCTCACACAAGTGTTACAAGATTCTTTAGGAGGGCATGCTAAAACTTTGATGTTTGTTCATATAAATCCTGAACTTAATGCTATTGGGGAGACACTTAGCACACTCAAGTTTGCTGAGAGGGTTTCGTCCATTGAACTTGGAGCTGCTCAATCTAACAAAGAAACCGGTGAAATCCGAGATCTAAAGGAAGAGATATCAAGTCTCAGATTAGCATTGGAGAAGAAGGAAGCTGAATTGGAGCAATGGAAGGCAGGGAATGCTCGAAACGCCCTTGATTCTCAAAAACCAAGAGCTGTTTCACCTTTTCAATTACCAAAATATGGCACTAGTGGCAATATGAAGCATGAAACTGGTCAAAGACTCATGGATGATAGAAGCTTTGAGTCTAGAAGTTGCTCTTCTGGTAAGCAAAGAAGGTCAAGGTTTCCCTCATCATTTATAGACAAGGACTCTATGCCAAAAATGACTCTTCTGAGTGAAGAAAAGTTAGTGAGCTCAGGGAAAGGAAGATCACCATCTCCTCCAGTGAGAAGATCATTATCAAATGATAGAGGGACAGTCATTAAAAGCAAGGCTAAAACTGAAACAACAGACAACCAACCAATATTAAAGCATCCATTTCCTGCTAGAGTACCAGCTAACAAATCCATTTCCACAATGCCAGTGGCTTCATCCACTGACAACAACACAAGAATGTATGTGAATTCACAAGAGCCGGTAAAGCAGGAAAACATTTCTGAAACACTCTTCAACCTCCAGAAGGTAAACTATAAGAAAGTACATCAAGAACATGAAGAGGAACAATTCAAGCAAGCACTCAGTGCAGTAAGACAAGGTGGTATTAGAAAAAGCAAGTTTGAGAGTAAGGCTAAAGCCAAGCATCCTCCTCAACTATTATCACCCTTTAAGATTCAAAAGCCTGATTTGATCGCAACATTTATTCCTGACATGGATTTTGCTGGTGAAATGACTTTGGAGCCAACTCCAAAGAACGATTACTCTGAGGCTGAAAATGATCTTAGATTTATGGAGTCTGCTGTCCATGGTGCTTTGAGTCTCAAAAAAATACGCCAGAACTTTGCAAGGAATTTTCAGAACCTTGAATCAAGAGGAATAGTGCAAACAGGAGAGCCTTTATTGGTTAGCAAAGTTGAAAACAAAGTCGTGAATGGTTCGGGTAGCAATCTTAAAGAAGGAAGCAATGCATCCACGCCTGAATTTAGAAGAAGCCGATCTACCCCACGTGGAAAGTTTTTTGGTTTATCTTGA 3423 0.4064 MPQESSQNSFFTSPSKRGLKSLVSINKEASCTAATEESFNDNELAQRKAEEAALRRYKATEWLREMDHVASSSLSPTPSQQDFCLSLRNGLILCNVLNKVNPGAVLKVVDNPGLAVQSAEGAAHSAIQYFENMRNFLEAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGFYEWKLSGGVGVWRYGGTVRITSFPKKSPSSIVGSESADESLDEPESSQYEQLLEFLQLSEDFLIEETRTANALAFLYDHFGLRLLQAYLREANGIEDLPLNAMVIDTLLSKVVKDFSSLLVSQGNQLGLFLKKILKVDIGCLSKREFIEAISLYLNQRSSLASNDFSKFCNCGGKRDSIRQNANYSAKYVEVINTQQKQLEGMKYFFEETKLEVRQIQSEWEEELSRLEHHIKSLEVASSSYHKLLEENRLLYNQVQDLKGAIRVYCRVRPFLPGQSNGPSTVDYIGENGDMMIVNPLKHGKDARRVFSFNKVFGTSVTQEQIYADTQSLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLTTEETWGVNYRALRDLFHISKERAGSIKYEVFVQMIEIYNEQVRDLLVSDGSNRRLDIRNTSQLNGINVPDAFLVPVTCTQDVLDLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGRELVSNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAIGETLSTLKFAERVSSIELGAAQSNKETGEIRDLKEEISSLRLALEKKEAELEQWKAGNARNALDSQKPRAVSPFQLPKYGTSGNMKHETGQRLMDDRSFESRSCSSGKQRRSRFPSSFIDKDSMPKMTLLSEEKLVSSGKGRSPSPPVRRSLSNDRGTVIKSKAKTETTDNQPILKHPFPARVPANKSISTMPVASSTDNNTRMYVNSQEPVKQENISETLFNLQKVNYKKVHQEHEEEQFKQALSAVRQGGIRKSKFESKAKAKHPPQLLSPFKIQKPDLIATFIPDMDFAGEMTLEPTPKNDYSEAENDLRFMESAVHGALSLKKIRQNFARNFQNLESRGIVQTGEPLLVSKVENKVVNGSGSNLKEGSNASTPEFRRSRSTPRGKFFGLS* 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2755 1140 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 22 1135 - -
Gso8g2755 1140 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 435 799 IPR027417 -
Gso8g2755 1140 MobiDBLite consensus disorder prediction 835 853 - -
Gso8g2755 1140 Coils Coil 776 803 - -
Gso8g2755 1140 MobiDBLite consensus disorder prediction 805 947 - -
Gso8g2755 1140 PRINTS Kinesin heavy chain signature 509 530 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso8g2755 1140 PRINTS Kinesin heavy chain signature 632 649 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso8g2755 1140 PRINTS Kinesin heavy chain signature 663 681 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso8g2755 1140 PRINTS Kinesin heavy chain signature 712 733 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso8g2755 1140 Coils Coil 390 410 - -
Gso8g2755 1140 PANTHER KINESIN-LIKE PROTEIN KLP-3 22 1135 - -
Gso8g2755 1140 SMART ch_5 55 172 IPR001715 GO:0005515
Gso8g2755 1140 Gene3D Kinesin motor domain 377 764 IPR036961 -
Gso8g2755 1140 Pfam Kinesin motor domain 440 762 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso8g2755 1140 ProSiteProfiles Kinesin motor domain profile. 434 762 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso8g2755 1140 SUPERFAMILY Calponin-homology domain, CH-domain 47 201 IPR036872 -
Gso8g2755 1140 MobiDBLite consensus disorder prediction 1110 1127 - -
Gso8g2755 1140 SMART kinesin_4 432 770 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso8g2755 1140 ProSiteProfiles Calponin homology (CH) domain profile. 53 174 IPR001715 GO:0005515
Gso8g2755 1140 Gene3D - 45 173 IPR036872 -
Gso8g2755 1140 MobiDBLite consensus disorder prediction 1110 1140 - -
Gso8g2755 1140 MobiDBLite consensus disorder prediction 893 919 - -
Gso8g2755 1140 Pfam Calponin homology (CH) domain 56 174 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2755 Gso-Chr8 45252627 45262957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2755 425 762 Calmodulin-binding Proteins AT5G65930 42.442 1.82e-74 268
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2755 8 45252627 45262957 Gso8g2755 8 45252627 45262957 ECH
Gso18g0625 18 6902366 6913207 Gso8g2755 8 45252627 45262957 GST
Gso8g2755 8 45252627 45262957 Gso14g0100 14 880917 889830 PCT
Gso8g2755 8 45252627 45262957 Gso2g2572 2 49973732 49982813 PCT
Gso14g0100 14 880917 889830 Gso8g2755 8 45252627 45262957 PCT
Gso2g2572 2 49973732 49982813 Gso8g2755 8 45252627 45262957 PCT