Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2728 ATGGGAACCTATGTGGAAAATTTCGCAAGTGAGGAGGAACATGTCTTTCGTAGCCAATACTCATCTGTCCCTGTCCCTGACAATGTGACATTGCCGGAATTCGTGCTCCAAAATGCTGAATTGTATGCAGACAAGGTTGCATTTGTGGATGCTGTGACTGGAAAAGGGGTTACTTTTAGTGAGGTGGTGAGGGGTGTACACAGGTTTTCAAAGGCCTTAAGATCTCTTGGTCTGAGGAAAGGCCTTGTTGTGATTGTAGTGCTTCCAAATGTGGTAGAGTATGCCATTGTTGCTTTGGGGATAATGGCTGCTGGTGGGGTGTTCTCAGGTGCAAATCCAACATCACATGTATCAGAAATTAAGAAGCAGGCAGAGTCTGCTGATGCCAAATTAATTGTCACAAATGTCACAAACTATGAAAAGGTGAAGGCTTTGGAGCTACCTATTATTGTGCTAGGAGATGAAGTTGTTGAAGGTGCCATGAATTGGAACAAGTTGCTTGAAGCAGCAGACCGTGCAGGTGATGATTTGGCAAGGGAGCCTATTCAGCAGAATGATCTTTGTGCCATGCCATTCTCATCAGGCACCACAGGAATGTCAAAGGGTGTGATGCTCACTCATAGAAATCTAGTGGCTAATCTTTGCTCTACACTCTTTGGTGTGACCAAAGAAATGGAGGGTCAGGTCACCACACTAGGCTTGATTCCCTTCTTTCACATTTATGGCATCACTGGAATATGTTGTGCCACTCTTAAGAGCAAAGGGAAAGTTGTGGTGATGGGAAGGTTTGAGTTGAAAACATTTCTTAATGCCTTGATCACTCATGAGGTCACATTTGCACCCATTGTGCCCCCTATCATTCTCACCTTGGTGAAAAATCCAATAGTGGATGAATTTGACCTCAGAAAGCTAAAACTCCAGGCCATTATGACTGCAGCAGCTCCACTTGCACCAGAACTCCTTAATGCTTTTGAACATAAGTTCCCTGGCGTTGCTGTCCAAGAGGCATATGGACTAACTGAGCATAGCTGCATCACACTCACTTATGTACAAAAAGGATTGGGAAGTACTAATAAAAACTCAGTGGGATTCATCCTCCCAAATTTGGAAGTCAAGTTTGTTGATCCTGACACTGGTCGATCCCTCCCAAGGAACACACCCGGGGAACTCTGTGTAAGAAGCCAATGTGTAATGCAAGGTTACTATAAACAGGAGGATGAGACTGCCCAAACCATTGACAAGAATGGATGGCTTCACACAGGTGACATAGGATTCATAGATGATGAAGAAAATGTATTTATCGTTGATCGTATCAAGGAGTTGATTAAGTACAAAGGCTTCCAAGTTGCTCCTGCAGAGTTAGAGGCCATATTGCTAAGCCATTCATCAGTTGAAGATGCAGCTGTAGTGCCATTACCAGATGAAGAGACAGGGGAAATCCCAGCTGCAAGTGTTATTTTGAGCCCAGGTGCAAAAGAGAGTGAGGAGGACATCATGAACTATGTTGCCTCCAATGCTGCACATTACAAGAAAGTGAGAGTGGTGCACTTTGTGGATGCCATACCAAAGTCACCCTCTGGGAAAATAATGAGAAGGCTTGTCAAAGAGAAGATGGTGGAAAAGATGAAGACTAAGTCCTTAACAAAATCTAAGAACATCTAA 1662 0.438 MGTYVENFASEEEHVFRSQYSSVPVPDNVTLPEFVLQNAELYADKVAFVDAVTGKGVTFSEVVRGVHRFSKALRSLGLRKGLVVIVVLPNVVEYAIVALGIMAAGGVFSGANPTSHVSEIKKQAESADAKLIVTNVTNYEKVKALELPIIVLGDEVVEGAMNWNKLLEAADRAGDDLAREPIQQNDLCAMPFSSGTTGMSKGVMLTHRNLVANLCSTLFGVTKEMEGQVTTLGLIPFFHIYGITGICCATLKSKGKVVVMGRFELKTFLNALITHEVTFAPIVPPIILTLVKNPIVDEFDLRKLKLQAIMTAAAPLAPELLNAFEHKFPGVAVQEAYGLTEHSCITLTYVQKGLGSTNKNSVGFILPNLEVKFVDPDTGRSLPRNTPGELCVRSQCVMQGYYKQEDETAQTIDKNGWLHTGDIGFIDDEENVFIVDRIKELIKYKGFQVAPAELEAILLSHSSVEDAAVVPLPDEETGEIPAASVILSPGAKESEEDIMNYVASNAAHYKKVRVVHFVDAIPKSPSGKIMRRLVKEKMVEKMKTKSLTKSKNI* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2728 553 SUPERFAMILY Acetyl-CoA synthetase-like 18 540 - -
Gso8g2728 553 Pfam AMP-binding enzyme 37 444 IPR000873 -
Gso8g2728 553 Gene3D - 440 543 IPR045851 -
Gso8g2728 553 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Gso8g2728 553 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Gso8g2728 553 Gene3D - 13 439 IPR042099 -
Gso8g2728 553 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 541 - -
Gso8g2728 553 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 8 541 - -
Gso8g2728 553 CDD 4CL 25 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2728 Gso-Chr8 44972236 44976283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2728 11 539 Monolignol Biosynthesis Gene Families AT1G62940 73.446 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2728 K01904 - gmx:100814237 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0654 18 7242891 7246925 Gso8g2728 8 44972236 44976283 GST