Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2715 ATGGCTGTAAACAATTGCTGTTTCGTGGAATGGAAAGAGCAGTTTGTTTCTCAGGAGCGCGGTAATCGTGTGGTTCACTATTACCTGAAGGATTCTGCTGGGGAATCCGTCCTTGCAGTTGTTGGCACTGAGAGGAGTGTTAGGCACATGTGCTATGTTGTTGCTGAGGAGTTTCTTGAAATTTGTGGGATGGAGGGTTCCATTCCAACCGGTTTCAAATGGAGATCTAGAAGAGAGGTGGTGGATTGGCTGACATCGACGCTATCAAAGCAGAACCTGCAGGGAGATAGAAGTGTATCAGCTGGTCATAACTTGGTACCATCTCATGAGGCCACAAATGACAGTGTCAATGAAATTACTGGTCTGTCTGCTCAAATAACAGATGACAAGGACTTTCCAACGAGTAACTCCAAATTGTCCAATTCAGACATTGTTTGGTCAGGAGTTGCGTGGAGATGTGGCAAACAACTTAAGCATTATCCTGCTTTTTTCAGGAATGGCATCAAAATAGCGATTCAATCCTTTGTTTTTGTTATGGGCAAGGGAGAGAACCATTATATTGCTTATGTAGAGGATATGTATGAAGACAGGAGGGGACAGAAAAAGATCAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTAGTTCCTGTACGAAATCCTCACCCTCGGGAAGTTTTTATCACACCTTATTCCCAAGTCATTAGTTCAGAGTGCGTAGATGGTTCTGCCACAGTCTTAACTCGTGAAGACTTTGAAAAATGCATGCCTTTTTTTTCCCCCACTTCAAGGGACAGAATACATTTGTGCTTTAGGCAGTTTAGAAGCAACAAAATCAAGCCCTTTGACTTGAGTAAATTGCGTGGTTACTATGCTCAACCAATTCTTTCTTGCTTACACCTTGATTCAATCCAGCACCCTGAGTTCCTAGCAAGAGAAGATGAAGAGTTGAGTGCAGGTGATGATGTGAAAGTAGGAGTCAAGAGGAGGAGGGGTGATAAGGGGTCTCCTCAGTCTTGGATAAGTCGCCAGGGGGTTAGGAAGTTAAGTAGAAATAAGCAAATGATGGTATACAAAACCTTCCAGGTTGCAAATTATGCAAGATCAGAAAGGATATTGCTTTCTCGGAAGCAGGTTGGGAGTCAACCTTGGTCTAACCACAAATACAAGGTTGATGACAAGATAGAGTTGCTTTGTCAAGATAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTTGTTCAGGTAGCCCGGAAGCAGTTGAAAGTCCAATATGATGATGTCCAGGATGAAGATGGAAGTGGAAATCTTGAGGAATGGATCCCTTCTTTCAAGTTAGCCAGGCCTGATAAACTTGGGATGAGGCATTCTGGCCGCCCCACCATCAGGCCAGCTCCAACTTATGAGGAACAAGAACTAGCTGTTGAGGTTGGAAGTGCAGTTGATGCATGGTGGAGTGATGGCTGGTGGGAGGGGGTTGTAACTAGAATTGACAACTGTGGGGATGATAGTGTTGAAGTCCACTTTCCTGGTGAATGCTTGCTGATGAATGTGTGCAAGAAGGATTTAAGAATATCTAGAGATTGGTTAGGGGACAGTTGGATTAACATTAAGGCAAAACCTGAAATAACTAAATCTATATTCACAGCTAATAATAGCTTTAACACAAAGCTTTCTGTGTCCCCATCTATTGCTAAAGATGTGGACTCTGTTGGTTTTGCTAATTCATGTCATGGTGATCCTGTTAGTAAGAAGTCAAATGAACCAGTTGTTATCAAAGAAGAGAATTTTGTGTCTTGTGATGGCTCTGATAAAGAAGAGAATTTTGTGTCATGTGATGGCTCTGCTGAAGATGGGGACTGTGTCCAGGATAATAAACCCTCTTCAGAAAAAAGTACTCAAGCTGATAATATTGATACACATATCAATTGTGATAATGAAGAGAATTGTGGTGATAATGATAATGATAACAATAGCAATGATGGTGGTGGTAACAAGAATGATGATGATAATGGCAATAAAGATATGGGGGTATTTGGAACTTCTGGACCGGACCAAGAAACTGTAGAGCTCATGGAAGTGGCTGTATAA 2097 0.4235 MAVNNCCFVEWKEQFVSQERGNRVVHYYLKDSAGESVLAVVGTERSVRHMCYVVAEEFLEICGMEGSIPTGFKWRSRREVVDWLTSTLSKQNLQGDRSVSAGHNLVPSHEATNDSVNEITGLSAQITDDKDFPTSNSKLSNSDIVWSGVAWRCGKQLKHYPAFFRNGIKIAIQSFVFVMGKGENHYIAYVEDMYEDRRGQKKIKVRWFHHNQEVKGVVPVRNPHPREVFITPYSQVISSECVDGSATVLTREDFEKCMPFFSPTSRDRIHLCFRQFRSNKIKPFDLSKLRGYYAQPILSCLHLDSIQHPEFLAREDEELSAGDDVKVGVKRRRGDKGSPQSWISRQGVRKLSRNKQMMVYKTFQVANYARSERILLSRKQVGSQPWSNHKYKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYDDVQDEDGSGNLEEWIPSFKLARPDKLGMRHSGRPTIRPAPTYEEQELAVEVGSAVDAWWSDGWWEGVVTRIDNCGDDSVEVHFPGECLLMNVCKKDLRISRDWLGDSWINIKAKPEITKSIFTANNSFNTKLSVSPSIAKDVDSVGFANSCHGDPVSKKSNEPVVIKEENFVSCDGSDKEENFVSCDGSAEDGDCVQDNKPSSEKSTQADNIDTHINCDNEENCGDNDNDNNSNDGGGNKNDDDNGNKDMGVFGTSGPDQETVELMEVAV* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2715 698 Gene3D - 136 288 IPR043151 -
Gso8g2715 698 ProSiteProfiles BAH domain profile. 168 287 IPR001025 GO:0003682
Gso8g2715 698 MobiDBLite consensus disorder prediction 628 642 - -
Gso8g2715 698 SMART BAH_4 168 287 IPR001025 GO:0003682
Gso8g2715 698 Pfam Agenet domain 394 468 IPR008395 -
Gso8g2715 698 MobiDBLite consensus disorder prediction 622 698 - -
Gso8g2715 698 PANTHER OS07G0607300 PROTEIN 4 659 - -
Gso8g2715 698 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 4 659 - -
Gso8g2715 698 Pfam BAH domain 171 276 IPR001025 GO:0003682
Gso8g2715 698 SMART agenet_At_2 475 533 IPR014002 -
Gso8g2715 698 SMART agenet_At_2 389 454 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2715 Gso-Chr8 44794117 44802749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2715 403 531 PHD Transcription Factor Family AT5G58610 30.075 4.45e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2715 - - gmx:100809407 1380.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2715 8 44794117 44802749 Gso8g2715 8 44794117 44802749 ECH
Gso18g0671 18 7579557 7586503 Gso8g2715 8 44794117 44802749 GST