Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2712 ATGAGAAACTCTGTCAATAAAGATGATGGAAGAATGAGAACTAATGTGATGAGAGAGAGGGAAGAAGAAGACAATCATTGGGACTACTCAACAAAGTTGATGCTTTATGATGACCCATGGAAGATAAAGAAATTGCTCACAAAGAGTGACCTTGGCAACTTGAGTAGACTCTTGCTCCCCAAGGAATTGATAGAGGACTTGGTGCTGCCTGTGTTGAGTGTTGAATCCCAAAGAGAAGCTAAGACTCAAAAGGGAACCAAAATTACTATTTGGGATGTGGACACCCAATCCATGCATTATCTTGTCTTCAAGTTTTGGGCTTCTTCAAGAAGTTATGTTTTCATTGACAACTGGAACAAAGATTTTGTTAATAGAAGGAGCTTGCATATTAAAGATGAAATTGGACTTCACTGGGATCTGTACAAAAATCGGTTTAATTTTTCCGTTCTTGTTCGTGCCCCTCTAAATTAA 471 0.3843 MRNSVNKDDGRMRTNVMREREEEDNHWDYSTKLMLYDDPWKIKKLLTKSDLGNLSRLLLPKELIEDLVLPVLSVESQREAKTQKGTKITIWDVDTQSMHYLVFKFWASSRSYVFIDNWNKDFVNRRSLHIKDEIGLHWDLYKNRFNFSVLVRAPLN* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2712 156 CDD B3_DNA 40 150 IPR003340 GO:0003677
Gso8g2712 156 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 6 152 - -
Gso8g2712 156 Gene3D - 39 150 IPR015300 -
Gso8g2712 156 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 6 152 - -
Gso8g2712 156 SUPERFAMILY DNA-binding pseudobarrel domain 38 151 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2712 Gso-Chr8 44784455 44784925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2712 38 145 B3 DNA Binding Superfamily AT3G26790 29.464 3.18e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2712 - - gmx:102668051 323.939