LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso8g2707	ATGGCTCTATTATTCTTCTACTTTTTGGTTCTTATTTCCTTTGCCTTCACAACCATTATAGTACAAAAAATAAGAAAGAAACCCAAGAAAACTGATGACACAACTTGTAAAATACCCCATGGTCCTAGAAAGCTACCTATTATAGGAAATATATACAATCTGCTATGCTCTCAACCCCATAGAAAATTAAGAGACCTGGCCATAAAATATGGACCCGTGATGCATCTTCAACTTGGACAGGTTTCAACTATTGTCATTTCATCCCCTGAGTGTGCTAGGGAAGTGATGAAAACCCATGACATTAACTTTGCCACAAGGCCTAAAGTTCTAGCTATTGAAATAATGTCTTACAATTCCACAAGTATAGCTTTTGCTGGCTATGGAAATTATTGGAGGCAGCTAAGAAAAATATGCACATTGGAGCTTTTAAGCCTAAAACGCGTCAACTCATTCCAGCCAATTAGAGAAGATGAGCTCTTCAATCTTGTCAAATGGATTGATTCAAAGAAAGGATCCCCCATCAACCTCACTGAAGCAGTACTTACATCAATTTACACAATTGCTTCAAGGGCTGCCTTTGGCAAGAATTGCAAAGACCAAGAAAAATTTATATCAGTGGTTAAAAAAACATCAAAACTTGCTGCAGGTTTTGGCATTGAAGATTTGTTTCCTTCTGTTACTTGGCTTCAACATGTCACTGGCTTGAGGGCTAAGCTTGAGAGGTTGCATCAACAGGCTGATCAGATAATGGAAAACATCATCAATGAGCATAAAGAGGCAAATTCGAAAGCCAAGGATGACCAAAGTGAAGCAGAAGAAGATCTTGTGGATGTTCTCATACAATATGAGGATGGGAGCAAGAAGGATTTTTCCTTAACTAGAAACAACATCAAGGCCATAATTCTGGACATTTTTGCTGCTGGAGGTGAGACAACAGCAACAACCATAGATTGGGCAATGGCTGAAATGGTAAAGAATCCAACAGTAATGAAGAAAGCACAATCTGAGGTGAGAGAGGTATGCAATATGAAAGCAAGGGTTGATGAAAATTGCATCAATGAACTTCAATATTTGAAACTAATTGTGAAAGAGACCTTGAGGTTGCACCCTCCAGCTCCTCTTTTGCTGCCAAGAGAATGTGGTCAAACATGTGAGATACATGGTTATCACATACCAGCCAAAACCAAGGTCATAGTCAATGCCTGGGCAATTGGAAGAGATCCAAACTATTGGACTGAATCAGAGAGGTTTTATCCTGAGAGGTTCATTGATAGCACTATTGACTACAAAGGGAGTAATTTTGAGTTCATTCCTTTTGGTGCTGGAAGAAGGATATGCGCAGGAAGCACATTTGCTTTGAGAGCTGCGGAACTAGCCCTTGCAATGTTGTTGTATCACTTTGATTGGAAGCTTCCAAGTGGAATGAGAAGTGGAGAACTGGACATGAGTGAGGATTTTGGAGTCACAACTATAAGAAAAGATAATCTATTCTTGGTTCCTTTTCCATATCATCCTTTGCCTGTCTCATGA	1530	0.3941	MALLFFYFLVLISFAFTTIIVQKIRKKPKKTDDTTCKIPHGPRKLPIIGNIYNLLCSQPHRKLRDLAIKYGPVMHLQLGQVSTIVISSPECAREVMKTHDINFATRPKVLAIEIMSYNSTSIAFAGYGNYWRQLRKICTLELLSLKRVNSFQPIREDELFNLVKWIDSKKGSPINLTEAVLTSIYTIASRAAFGKNCKDQEKFISVVKKTSKLAAGFGIEDLFPSVTWLQHVTGLRAKLERLHQQADQIMENIINEHKEANSKAKDDQSEAEEDLVDVLIQYEDGSKKDFSLTRNNIKAIILDIFAAGGETTATTIDWAMAEMVKNPTVMKKAQSEVREVCNMKARVDENCINELQYLKLIVKETLRLHPPAPLLLPRECGQTCEIHGYHIPAKTKVIVNAWAIGRDPNYWTESERFYPERFIDSTIDYKGSNFEFIPFGAGRRICAGSTFALRAAELALAMLLYHFDWKLPSGMRSGELDMSEDFGVTTIRKDNLFLVPFPYHPLPVS*	510

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso8g2707	509	SUPERFAMILY	Cytochrome P450	39	500	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso8g2707	509	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	439	448	IPR017972	GO:0005506\|GO:0016705
	Gso8g2707	509	PANTHER	CYTOCHROME P450 71B11-RELATED	8	506	-	-
	Gso8g2707	509	PRINTS	P450 superfamily signature	307	324	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso8g2707	509	PRINTS	P450 superfamily signature	360	371	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso8g2707	509	PRINTS	P450 superfamily signature	437	446	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso8g2707	509	PRINTS	P450 superfamily signature	446	457	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso8g2707	509	PANTHER	CYTOCHROME P450 FAMILY 71 PROTEIN	8	506	-	-
	Gso8g2707	509	Pfam	Cytochrome P450	39	483	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gso8g2707	509	Coils	Coil	232	274	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso8g2707	Gso-Chr8	44742074	44744218	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso8g2707	1	504	Cytochrome P450	AT1G13110	40.891	5.41e-135	398

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso8g2707	-		-	gmx:100808862	999.193

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