Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2701 ATGTCGTTTGTCTTATCACTCCATTTTCTTAGACACTTTGGCAGTAGTTTTCTGACATTTTTCGTGAAGCCAATTTTCATGCATGGCTTATCTGGTTTCCTTCATCTACTGTTGTTAGTGGCGCTTTTAGTGTCACTGGTGTGGAAGAAAGTCACAGTTGGAGCCAGAGAAAGTTCCAAAGAGAAAATTAATAACACCTTGTTTCCAAGGACAAGGCTTTGTTCTCTGGTTGTTTCTGCATTCAACCTTCTACTCTTTTTGTTTAATTACTTTTGTTGGTATAGAAAAGGTTTGTCACAAGAAAAGCTTGTGACCCTTTTGGATTTAGTGCTCAAAGTGGTTGCTTGGGGTGTTGGTGGTGTTTGCTTGCACGATGAGCTCTTCATTTCAAGGGAAAGAAGATTGCCATTCTTCTTCAGAGGTTGGTGTGTCCTCTACCTCTTTGTTTCTGGCTATTGCTTTATAGTGAACATTGTTCTCTATGAAAAGCATGCTGCTTTGCCTATTCAGTGCTTAGGTTCTGATGTTTCCTCTGTTTGTGTGGGTTTATTCTTCTGTTACTTGGGTTTTTTTGTAAAATTTGAGGGTGGAGTGAGAAATAGTACTCTACAAGAATCTCTTTTGAATGGTGATTCAAATGATAATGATGTGTTTGGGACTAATGAAACCAACGGGGGTGACACTGTTACCCCTTACTCTTATGCTGGAATTTTCTGCATTCTTACCTTCTCTTGGGTTAGTCCTCTGATTGCTGGTGGCAAGAAGAAGAGTTTGGACCTTGAGGATGTCCCCCAACTTGACAAAAGAGACAGTTTAATTGGAGCATTTCCAATTTTTAGTGATAAGCTTGAGGCATATTGTGGAGCAACTAACACATTAACCACACTTAAGTTAGTGAAGTCATTAGTATTCTCAACCTGGAAAGAGATTATTTTCACAGCTATCCTTGCACTGGTAAACACATTGGCGACTTTTGTCGGTCCCTATCTCATTGATTGTTTTGTTCAATACCTTAATGGAAAACGACAATTTGAAAAAGAGGGCCTTGTTTTGGTGTCTGCATTTTGTGTGGCAAAGCTTGTGGAGTGCCTGACAAAGAGGCACTGGTTCTTTAGGTTGCAGCAGGTTGGAATACGAATGCAAGCACTGCTTGTGACAATCATATATAATAAAGCTTTGAACCTATCATGCCAATCAAAGCAAGGACAGACCACAGGGGAAATAATCAACTTCATGAGTGTTGATGCAGAAAGAGTTGGTGAGTTCAGTTGGCACCTACATGATCTGTGGTTAGTAGTCCTACAGGTTTTAGTAGGCTTGTTGGTTTTATATAAAAATCTTGGGCTTGCTTCAATTGCTGGTTTTGTTGCAATTCTCATTGTAATGTGGGCAAACATTCCCTTGGGTTCAACCCAAGAGAAGTTTCACAACAAGTTGATGGAGTCAAGAGATGAAAGAATGAAAGCGACATCTGAGATTTTGAGGAACATGAGGATTCTCAAACTGCAAGGATGGGAAATGAAGTTTTTGTCTAAGATAACTGAACTCAGAAAGATCGAACAAGGCTGTTTAAAAAAAGTTATATACACTTTAGTCTTGATCATATCTATATTTTGGTGTGCCCCAGCATTTGTATCAGTGGTTACTTTTTGTACTTGTATGGTCATTGGGATCACCCTTGAATCAGGGAAGATCTTGTCTACACTTGCAACATTCCAGATTCTCCAAGAACCCATTTATAATCTTCCAGAGACAATTTCAATGATGGCACAAACTAAGGTTTCTCTTGACAGGATTGCATCTTTCCTTCGTCTCGATGAGATGCTATCTGATGTTGTGAAGAAGCTTCCGCCGGGTAGTTCTGATATAGCAATTGAAGTGGTTGATGGGAATTTCTCTTGGGATTCATTTTCCCCTAATACAACATTGCAAAACATAAATCTAAGAGTTTTTCATGGCATGAGGGTTGCAGTTTGTGGTACTTTTGGATCAGGCAAGTCTACTTTACTTTCTTGTATATTGGGAGAAGTACCAAAGAAATCAGGGATCCTAAAGGTGTGTGGAACAAAGGCCTATGTAGCTCAGTCACCATGGATACAAAGTAGCACCAAAGAGGATAATATATTGTTTGGCAAGGATATGGAAAGGGAAAGGTATGAGAAGGTCCTTGAAGCTTGTTGCCTAAAGAAGGATCTAGATATTTTATCATTTGGAGATCAGACTATTATAGGAGAGAGGGGGATAAATTTGAGTGGTGGACAGAAGCAAAGAATACAAATTGCTCGTGCTCTATACCATGATGCTGATATATATCTATTTGATGATGTGTTTAGTGCTGTGGATGCTCATACAGGATCTCATCTTTTTAAGGAATGCTTATTGGACCTTTTGAGTTCAAAGACTGTGGTTTATGTCACCCATCAAGTAGAGTTCTTACCCGCTGCTGACCTTATTTTGGTCTTGAAAGATGGGAAGATTACTCAATGTGGAAAATATAATGATCTACTCAACTCAGGCACTGATTTTATGGAACTTGTTGGTGCTCATAAAGAAGCTTTGTCTGCACTTGATTCATTAGATAGAGGGAAGGAATCTGATAAAATAAGTACATCACAACAGGATATAAGTGTCTCTCTTTCTCATGGAGCTGAAGAAAAAGAAGTGAAGAAAGATGTGCAAAATGGTGTAAAAGATGACAAATGTGGTCCAAAAGGCCAACTTGTTCAAGAAGAAGAAAGGGAGAAAGGTAAAGTTGGCTTTTCAGTTTATTGGAAATATATCACAGCAGCATATGGAGGAGCACTTGTACCACTCATATTGTTGGCTGAAATTTTGTTTCAACTTCTTCAAATTGGAAGCAATTATTGGATGGCTTGGGCAACTCCTATCTCAACTAATGTTGAGCCACCTGTTGGAGGAAGTAAGCTTATAGTTGTCTATGTAGCTTTGGCCATAGGAAGTTCTGTTTGTGTCCTTGCAAGAGCAACACTTGTAGCCACAGCTGGTTATAAGACAGCTACTTTAGTCTTCAACAACATGCATATCCGCATTTTCCGTGCTCCAATGTCATTTTTTGATTCCACTCCAAGTGGGAGAATCCTTAATAGGGCTTCTACTGACCAAAGTGCAGTGGATATAGACATTCCTCTTCAAACTGGAGCATTGGCTTCCTCTGTGATCCATCTTCTCGGAATTATAGTGGTGATGTCTCAAGTTGCATGGCAGGTTTTCATTGTCTTTATTCCTATTACAGCAATCAGCATCTGGTATCAGCAATATTATTTACCATCAGCCCGGGAACTATCCCGTTTAGTAGGGGTATGCAAGGCTCCTGTGATTCAACACTTTTCTGAAACAATATCAGGTGCATCAACCATCAGGAGCTTTGATCAGGTACCAAGATTTCAGCAAACAAATATTAAAATGATGGATGGATATTCTCGCCCCAAGTTCAACAAAGCTGGTGCTATGGAATGGTTGTGTTTTCGTTTAGATATACTGTCTTCTATGACATTTGCCTTTTGCTTGATATTCTTGATATCTATTCCACAGGGATTCATAGATTCAGGTGTTGCTGGTTTAGCTGTAACCTATGGCCTTAATCTAAACATCATACAATCATGGATGATATGGGATCTTTGCAACTTGGAGACCAAAATTATATCAGTAGAAAGAATACTTCAGTATACTTCCATTCCTAGTGAGCCTCCTCTTGTTGTAGAGGAAAACCAGCCACATGATTCTTGGCCATCATATGGCAGGATTGATATTCACAACTTGCAGGTACGTTATACTCCACGTATGCCATTTGTGTTGCATGGTCTTACATGCACATTTCATGGAGGATTGAAAACTGGAATTGTTGGGAGAACTGGAAGTGGTAAATCAACTCTCATACAAACACTGTTCCGAATTGTCGAGCCTACTGTTGGGAGAATTATGATTGATGGCATCAACATCTCTTCCATTGGACTTTATGATTTGAGGTCTAGACTGAGTATCATTCCTCAGGATCCAACCATGTTTGAAGGTACTGTGAGAACTAATCTAGACCCACTTGAAGAGTACACAGATGAACAAATTTGGGAGGCCCTTGATAAGTGTCAACTTGGAGATGAAGTTAGAAGGAAAGAAGGAAAGCTAGACTCTTCAGTTTGTGAGAATGGAGAGAATTGGAGTATGGGCCAAAGACAATTGGTTTGTCTTGGTAGGGTGTTGCTTAAGAAGAGTAAGGTCTTGGTGCTAGATGAAGCTACAGCATCTGTTGACACTTCTACAGATAATTTGATTCAGCAAACTCTAAGGCAACACTTCCCTAATTCCTCAGTCATTACCATTGCACATAGAATAACTTCGGTCATTGATAGTGATATGGTTCTACTACTTAATCAAGGACTTATTGAGGAGTATGATTCCCCAACAAGGTTGCTAGAGGACAAGTTATCTTCTTTTGCTCGGCTTGTTGCAGAGTATGCCACAAGGACCAATTCCAGTTTTGACCAACTAAAATAA 4512 0.3954 MSFVLSLHFLRHFGSSFLTFFVKPIFMHGLSGFLHLLLLVALLVSLVWKKVTVGARESSKEKINNTLFPRTRLCSLVVSAFNLLLFLFNYFCWYRKGLSQEKLVTLLDLVLKVVAWGVGGVCLHDELFISRERRLPFFFRGWCVLYLFVSGYCFIVNIVLYEKHAALPIQCLGSDVSSVCVGLFFCYLGFFVKFEGGVRNSTLQESLLNGDSNDNDVFGTNETNGGDTVTPYSYAGIFCILTFSWVSPLIAGGKKKSLDLEDVPQLDKRDSLIGAFPIFSDKLEAYCGATNTLTTLKLVKSLVFSTWKEIIFTAILALVNTLATFVGPYLIDCFVQYLNGKRQFEKEGLVLVSAFCVAKLVECLTKRHWFFRLQQVGIRMQALLVTIIYNKALNLSCQSKQGQTTGEIINFMSVDAERVGEFSWHLHDLWLVVLQVLVGLLVLYKNLGLASIAGFVAILIVMWANIPLGSTQEKFHNKLMESRDERMKATSEILRNMRILKLQGWEMKFLSKITELRKIEQGCLKKVIYTLVLIISIFWCAPAFVSVVTFCTCMVIGITLESGKILSTLATFQILQEPIYNLPETISMMAQTKVSLDRIASFLRLDEMLSDVVKKLPPGSSDIAIEVVDGNFSWDSFSPNTTLQNINLRVFHGMRVAVCGTFGSGKSTLLSCILGEVPKKSGILKVCGTKAYVAQSPWIQSSTKEDNILFGKDMERERYEKVLEACCLKKDLDILSFGDQTIIGERGINLSGGQKQRIQIARALYHDADIYLFDDVFSAVDAHTGSHLFKECLLDLLSSKTVVYVTHQVEFLPAADLILVLKDGKITQCGKYNDLLNSGTDFMELVGAHKEALSALDSLDRGKESDKISTSQQDISVSLSHGAEEKEVKKDVQNGVKDDKCGPKGQLVQEEEREKGKVGFSVYWKYITAAYGGALVPLILLAEILFQLLQIGSNYWMAWATPISTNVEPPVGGSKLIVVYVALAIGSSVCVLARATLVATAGYKTATLVFNNMHIRIFRAPMSFFDSTPSGRILNRASTDQSAVDIDIPLQTGALASSVIHLLGIIVVMSQVAWQVFIVFIPITAISIWYQQYYLPSARELSRLVGVCKAPVIQHFSETISGASTIRSFDQVPRFQQTNIKMMDGYSRPKFNKAGAMEWLCFRLDILSSMTFAFCLIFLISIPQGFIDSGVAGLAVTYGLNLNIIQSWMIWDLCNLETKIISVERILQYTSIPSEPPLVVEENQPHDSWPSYGRIDIHNLQVRYTPRMPFVLHGLTCTFHGGLKTGIVGRTGSGKSTLIQTLFRIVEPTVGRIMIDGINISSIGLYDLRSRLSIIPQDPTMFEGTVRTNLDPLEEYTDEQIWEALDKCQLGDEVRRKEGKLDSSVCENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTSTDNLIQQTLRQHFPNSSVITIAHRITSVIDSDMVLLLNQGLIEEYDSPTRLLEDKLSSFARLVAEYATRTNSSFDQLK* 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2701 1503 ProSitePatterns ABC transporters family signature. 750 764 IPR017871 GO:0005524
Gso8g2701 1503 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 625 848 IPR003439 GO:0005524
Gso8g2701 1503 Gene3D ABC transporter type 1, transmembrane domain 289 607 IPR036640 GO:0005524|GO:0016021
Gso8g2701 1503 Gene3D ABC transporter type 1, transmembrane domain 900 1236 IPR036640 GO:0005524|GO:0016021
Gso8g2701 1503 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1257 1489 IPR003439 GO:0005524
Gso8g2701 1503 CDD ABCC_MRP_domain2 1253 1473 - -
Gso8g2701 1503 CDD ABC_6TM_ABCC_D1 312 599 IPR044746 GO:0140359
Gso8g2701 1503 Gene3D - 1238 1491 IPR027417 -
Gso8g2701 1503 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 311 591 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso8g2701 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 622 847 IPR027417 -
Gso8g2701 1503 Pfam ABC transporter transmembrane region 938 1180 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso8g2701 1503 Pfam ABC transporter transmembrane region 311 578 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso8g2701 1503 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 938 1218 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso8g2701 1503 Gene3D - 608 870 IPR027417 -
Gso8g2701 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1245 1479 IPR027417 -
Gso8g2701 1503 SUPERFAMILY ABC transporter transmembrane region 936 1237 IPR036640 GO:0005524|GO:0016021
Gso8g2701 1503 SMART AAA_5 652 825 IPR003593 -
Gso8g2701 1503 SMART AAA_5 1281 1466 IPR003593 -
Gso8g2701 1503 Pfam ABC transporter 643 776 IPR003439 GO:0005524
Gso8g2701 1503 Pfam ABC transporter 1272 1420 IPR003439 GO:0005524
Gso8g2701 1503 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 86 1503 - -
Gso8g2701 1503 CDD ABCC_MRP_domain1 625 825 - -
Gso8g2701 1503 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 86 1503 - -
Gso8g2701 1503 CDD ABC_6TM_ABCC_D2 936 1230 IPR044726 GO:0140359
Gso8g2701 1503 SUPERFAMILY ABC transporter transmembrane region 301 606 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2701 Gso-Chr8 44678720 44685971 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2701 625 876 Calmodulin-binding Proteins AT2G36910 29.412 1.41e-24 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2701 - K05666 gmx:100775358 2848.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2701 8 44678720 44685971 Gso8g2701 8 44678720 44685971 ECH
Gso2g2535 2 49730048 49736348 Gso8g2701 8 44678720 44685971 PCT