Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2699 ATGTTCTTCCTCTTCTCTCACTACTACTCTTCCATGATGCACCATGGAACTGATTTTCTCCTCCAACCTATTTTCACACGAGGGGTGTCTGCTTCACTCAACCTAGTTTTGTTACTTGTGCTTGTTGTGTATTGGGTATGGAAGAAAGTGCAAGTGGACCACAGAGAAAAGAGTGAGAGAAAAGGATTCCGTAATGCTGGTTTCTTGTACTACAAACACAGTCTGGTTTGTAGCTTAGTTATTTGTGTGTTCAACCTTGTGTTGTGCTTACTAAGTTACTTTTACTTGTATAACAATTATGGTTCAGAGGAGCTTGTCACACTTACTGATTTAGCTCTCAAAACCATTGTTTGGGGTGCTGTTTGTGCTTATTTACATTCTAGAAACTCCGAGGCACAGGATCCGAGTTTACCACGTATGTTGAGAATTTGGTGGTGGGTCTATGCCTTTGTTTGTTGTTCTTGCCTTGTTATTGACTTCGTAGTCTATGCAAAGCATATTTTCTTGCCAGTTATGTATCTTGTTTATGATATAGGCTCCTCTATTACGAGTTTATTTCTATGTTATGTTGGATCACTTGGATGTTCTGTTAACAGTATGGCTAAGCTTGCCCCACTTGAAGAGCCCCTTTTGAATGGTGACTCTAATGTAAGCAACAATTCTGTTCCCATTAAGGCTAGAGGAAATGAAAATTTAACCTGGTATTCAAATGCTGGATTTTTCAGCATTCTTACTTTCTCATGGATCAGTCCTTTAATAACTCTAGGGAATGAGAAGACTTTAGAGCATGAGGATCTCCCACATCTTGCTACTGATGACAGTGTGGCTGGGATTTTCCCAACTCTTAGAAACAAACTTGAGTCAGAGTGTGGTAGTGTTAGGAATGTGACCACTCTTAAGCTCGTGAAGGTGTTATTCTTGTCAACTTGGCAAGGAATCCTTTTATCAGGTTTATTAGAATTCCTATATTCATGTGCTTCTTATGTTGGACCCTTTCTTATTGACATCCTTGTTCAGTACCTCAATGGGGAACACAAGTTTAAAAATGAAGGTTATGTTTTGGCTATGGCATTTGTTGCTGCAAAGCTTTTGGAGTGTGTTTCACAAAGGCACTGTATGTTTAGGTTCCAGCAGGTTGGGGTAAGCGTGCAATCAAAGTTGGTGGCAATGATTTATGCTAAAGGTTTGACACTTTCATGTCAATCAAAGGAGGTTCGTAGTACTGGGGAAATCATCAACTTGATGACTGTTGATGCTGAAAGGATTGGTGAATTTTGTTGGTACATGCATGATCCATGGATGTGTGTTCTGCAAGTTGCTTTGGCCTTGTTAATTCTCTATAGAAGTGTAGGGGTTGCTTCAATAGCTGCTCTTGCTGCCACTGTAACTGTGATGTTGCTAAACCTTCCTTTGTCATCATTGCAAGAAAAGTTCCAAGGCAAGGTAATGGAGTTCAAAGATAAAAGAATGAAGGCTACGTCTGAGATTCTGAAGAATATGAGGATTCTAAAACTGCAAGCATGGGAGATGAAGTTCTTGTCAAAGGTTATTCAGCTTAGGAAGACTGAGGAGATATGGCTACACAAATTTCTAGCTGGTACAGCAATTATTAGATTTCTCTTCACTAACGCCCCAACTTTTATTGCTGTGGTTACATTCGGTGCTTGTGTTCTCATGGGAATCCCACTTGAATCAGGGAAGGTCTTATCTGCACTTGCAACATTCAGAATTCTTCAAATGCCCATCTACAATCTTCCTGACACGATTTCAATGATTACACAAACTAAAGTTTCCCTTGATAGGATTGCATCATTTCTTCGCCTAGATGAGTTGCAGACTGATGTAATAGAGAAGCTTCCTTGGGGTAGTTCTGATAAGGCAATTGAATTAGTAGATGGAAATTTCTCTTGGGATTTATCTTCCCCTATTACAACATTGAAAAACATCAATCTCAAAGTTTTTCATGGTATGAGGGTTGCTGTATGTGGTACTGTTGGATCAGGCAAGTCTAGTTTACTTTCTTGTATAATAGGGGAAGTACCAAAGATATCGGGAACGCTTAAGATATGTGGAACAAAGGCTTATGTTTCTCAATCGCCATGGATACAGGGAGGCAAGATAGAAGACAACATATTATTTGGTAAAGAGATGGACCGGGAAAAGTATGAGAAGATTCTAGAAGCATGTTCCTTAACAAAAGACCTTGAGGTTCTACCATTTGGTGATCAGACCATTATTGGAGAGAAGGGGATCAATTTGAGTGGTGGACAGAAACAAAGAGTACAAATAGCCCGTGCTCTATACCAAGATGCTGACATATATCTGTTTGATGATCCCTTCAGTGCTGTTGATGCTCATACAGGATCTCATCTATTTAAGGAATGCTTGCTAGGCATTTTAAAATCAAAAACTGTGATATACATAACTCATCAAGTAGAGTTCTTACCTGATGCTGATCTAATATTGGTCATGAGAGATGGAAGGATAACACAGTCAGGAAACTACAATGATATTCTCAAGACAGGCACTGATTTTATGGCACTTGTAGGTGCACACAGAGCAGCTTTGTCTTCAATTAAGTCCTTAGAGAGAAGGCCAACATTTAAAACATCAAGTACCACCAAGGAGGACACAAAATCATTAAGTAAAATATATGATCAAAAGTCAGATGACACAATTGAGGCCAAAAGACAACTTGTTCAAGAAGAAAAACGGGAAAAGGGTAGAGTTGGGTTTAATATTTACTGGAAATACATCACAACAGCTTATGGAGGAGCTCTTGTACCCTTCATATTACTTTCACAAACACTCACCGTGGGTTTTCAGATTGCAAGCAATTATTGGATGACTGTGGCAACACCTGTTTCAGCAACAGCAGAACCTGATATTGGAAGCTTTACACTTATGGTTGTCTATGTTGCTTTGGCTATTGGAAGTTCCATTTTCACCTTTGCCAGAGCATTTCTTGCTGTGATAGCTGGATACAAGACAGCCACTGTTCTCTTCAATAAAATGCATTTGTGCATTTTTCAAGCACCGATATCCTTTTTTGATGCCACCCCAAGTGGTCGAATCCTTAATAGAGCTTCAACAGACCAAAGTGCACTAGATATGAAAATTGCTAATATATTGTGGGCAATTACCCTCAATCTGGTTCAACTCTTGGGAAATGTTGTTGTGATGTCTCAAGCTGCATGGCAGGTGTTTATAGTATTGATTCCTGTCATGGCAGCATGCATATGGTACCAGCGATACTATTCTGCATCAGCTAGAGAATTGGCGCGATTAGTTGGTACATGCCAAGCTCCAGTTATACAACATTTTTCTGAAACAATTTCTGGATCAACAACCATTAGAAGTTTTGAGCAAGAATCAAGATTTAATGACATCAATATGAAATTGATAGACAGATATTCCCAGCCCAAATTATACAGTGCAACTGCAATGGCATGGCTGATTTTCAGATTGGATATTTTATCTACTCTCACTTTTGCCTTCTGTTTGGTTTTCTTGATAACTTTTCCAAATTCAATGACTGCTCCTGGCATTGCGGGATTGGCTGTGACATATGGACTTAATCTAAATGCTGTACAAACTAAAGCAATATTGTTTCTTTGCAATTTGGAGAACAAAATTATATCTGTTGAAAGAATGCTCCAGTACACAACCCTCCCAAGTGAAGCTCCTTTCGTAATAAAAGACAACCAACCAGATTATTCTTGGCCATTATTTGGAGAGGTTCATATCCGGGATTTACAGGTTCGGTATGCTCCTCACTTGCCTATTGTTTTGCGAGGTCTTACTTGCACTTTTACTGCCGGAGCAAAAACTGGTATTGTGGGAAGAACAGGAAGTGGAAAATCAACTCTTGTGCAAACACTTTTCAGACTTATTGAACCTGTTGCTGGAGAAATATTGATAGATAACATTAACATCTCTTTGATTGGAATTCATGATTTGCGGTCTAGACTTAGCATTATTCCTCAAGAACCAACAATGTTTGAAGGGACTGTAAGAACCAACCTGGATCCACTGGAAGAGTACACGGATGAACAGATTTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGAAGTAAGGAGAAAAGAAGAGAAGCTTGACTCCATAGTTATGCAGAATGGAGAAAATTGGAGTATGGGCCAAAGGCAACTGGTCTGCCTTGGCCGTGTTCTGCTTAAGAAAAGCAAGATCTTGGTGCTTGATGAAGCTACTGCATCAGTTGATACAGCCACAGATAATATTATTCAGCAAACAGTTACGCAACATTTTTCAGAATGTACAGTCATTACCATTGCTCATAGGATAACTTCAATCCTTGAGAGTGACATGGTTTTGTTTTTAAATCAAGGGTTGATTGAGGAATATGATTCACCAAAGAAACTGCTTAAGAACAAATCTTCATCCCTAGCTCAACTAGTTGCAGAATACACAAGGAGGTCAAACTCTGGTTTTGGAAATTAA 4482 0.3927 MFFLFSHYYSSMMHHGTDFLLQPIFTRGVSASLNLVLLLVLVVYWVWKKVQVDHREKSERKGFRNAGFLYYKHSLVCSLVICVFNLVLCLLSYFYLYNNYGSEELVTLTDLALKTIVWGAVCAYLHSRNSEAQDPSLPRMLRIWWWVYAFVCCSCLVIDFVVYAKHIFLPVMYLVYDIGSSITSLFLCYVGSLGCSVNSMAKLAPLEEPLLNGDSNVSNNSVPIKARGNENLTWYSNAGFFSILTFSWISPLITLGNEKTLEHEDLPHLATDDSVAGIFPTLRNKLESECGSVRNVTTLKLVKVLFLSTWQGILLSGLLEFLYSCASYVGPFLIDILVQYLNGEHKFKNEGYVLAMAFVAAKLLECVSQRHCMFRFQQVGVSVQSKLVAMIYAKGLTLSCQSKEVRSTGEIINLMTVDAERIGEFCWYMHDPWMCVLQVALALLILYRSVGVASIAALAATVTVMLLNLPLSSLQEKFQGKVMEFKDKRMKATSEILKNMRILKLQAWEMKFLSKVIQLRKTEEIWLHKFLAGTAIIRFLFTNAPTFIAVVTFGACVLMGIPLESGKVLSALATFRILQMPIYNLPDTISMITQTKVSLDRIASFLRLDELQTDVIEKLPWGSSDKAIELVDGNFSWDLSSPITTLKNINLKVFHGMRVAVCGTVGSGKSSLLSCIIGEVPKISGTLKICGTKAYVSQSPWIQGGKIEDNILFGKEMDREKYEKILEACSLTKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGILKSKTVIYITHQVEFLPDADLILVMRDGRITQSGNYNDILKTGTDFMALVGAHRAALSSIKSLERRPTFKTSSTTKEDTKSLSKIYDQKSDDTIEAKRQLVQEEKREKGRVGFNIYWKYITTAYGGALVPFILLSQTLTVGFQIASNYWMTVATPVSATAEPDIGSFTLMVVYVALAIGSSIFTFARAFLAVIAGYKTATVLFNKMHLCIFQAPISFFDATPSGRILNRASTDQSALDMKIANILWAITLNLVQLLGNVVVMSQAAWQVFIVLIPVMAACIWYQRYYSASARELARLVGTCQAPVIQHFSETISGSTTIRSFEQESRFNDINMKLIDRYSQPKLYSATAMAWLIFRLDILSTLTFAFCLVFLITFPNSMTAPGIAGLAVTYGLNLNAVQTKAILFLCNLENKIISVERMLQYTTLPSEAPFVIKDNQPDYSWPLFGEVHIRDLQVRYAPHLPIVLRGLTCTFTAGAKTGIVGRTGSGKSTLVQTLFRLIEPVAGEILIDNINISLIGIHDLRSRLSIIPQEPTMFEGTVRTNLDPLEEYTDEQIWEALDMCQLGDEVRRKEEKLDSIVMQNGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTVTQHFSECTVITIAHRITSILESDMVLFLNQGLIEEYDSPKKLLKNKSSSLAQLVAEYTRRSNSGFGN* 1494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2699 1493 Gene3D - 1230 1483 IPR027417 -
Gso8g2699 1493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 624 850 IPR027417 -
Gso8g2699 1493 CDD ABCC_MRP_domain2 1245 1465 - -
Gso8g2699 1493 ProSitePatterns ABC transporters family signature. 753 767 IPR017871 GO:0005524
Gso8g2699 1493 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 314 594 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso8g2699 1493 Pfam ABC transporter 1265 1412 IPR003439 GO:0005524
Gso8g2699 1493 Pfam ABC transporter 646 780 IPR003439 GO:0005524
Gso8g2699 1493 CDD ABC_6TM_ABCC_D1 315 602 IPR044746 GO:0140359
Gso8g2699 1493 Gene3D - 611 871 IPR027417 -
Gso8g2699 1493 SUPERFAMILY ABC transporter transmembrane region 308 609 IPR036640 GO:0005524|GO:0016021
Gso8g2699 1493 CDD ABCC_MRP_domain1 628 828 - -
Gso8g2699 1493 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 204 1493 - -
Gso8g2699 1493 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1247 1481 IPR003439 GO:0005524
Gso8g2699 1493 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 930 1194 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso8g2699 1493 SMART AAA_5 1273 1458 IPR003593 -
Gso8g2699 1493 SMART AAA_5 655 828 IPR003593 -
Gso8g2699 1493 Gene3D ABC transporter type 1, transmembrane domain 285 610 IPR036640 GO:0005524|GO:0016021
Gso8g2699 1493 Gene3D ABC transporter type 1, transmembrane domain 891 1228 IPR036640 GO:0005524|GO:0016021
Gso8g2699 1493 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 204 1493 - -
Gso8g2699 1493 CDD ABC_6TM_ABCC_D2 928 1222 IPR044726 GO:0140359
Gso8g2699 1493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1237 1473 IPR027417 -
Gso8g2699 1493 SUPERFAMILY ABC transporter transmembrane region 928 1229 IPR036640 GO:0005524|GO:0016021
Gso8g2699 1493 Pfam ABC transporter transmembrane region 314 581 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso8g2699 1493 Pfam ABC transporter transmembrane region 930 1173 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso8g2699 1493 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 628 851 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2699 Gso-Chr8 44656181 44662728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2699 628 877 Calmodulin-binding Proteins AT2G36910 31.343 5.88e-27 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2699 - K05666 gmx:106794105 2902.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g2534 2 49714811 49720930 Gso8g2699 8 44656181 44662728 PCT