Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2696 ATGCAAACACCTCAGAATCATAAAATTTCTTATGGCTCTGGTGGGTTCTATGTTGAGCCTGTGCAAAATTTGGACTCATATTGCATACCATCAAGCGAGAACATAGACAATTACTCTTCCTCTGATAACAGCAGCCAAACAACCTACCCTTCAGTCCAAACTTTAGAACAATATTGCACCCTTGAATCTGCTTCCACAGGCAACAGTTTCCCTAGCCAAAATTCTCCACCTGCTCTCAGTTTCTCATCTAACAATAGTCTGTTGTCAAAGCTAGAGTCAAACTCATATGTGTTAAGGCCACAGCATTCTCTTGAAATTGCTAGTGGTTCACCCGAGGATGATTCTTATTTGACGCATGACCTTGATGGCCTGACACATAAGATAAGAGAGCTGGAAACTGCTATGCTGGGACCTAATGCAGATATGCTAGATATCTATGGTACCGTAATTCCAGAACCTGATTCATTTTTGTTAGAGGCTGAGAAGTGGAAGAAAATGATGGAAATATCATGTAGAGGGGATTTAAAAGAGATGCTTTATATGTGTGCAAAAGCAATGGCTGTGAATGATATGGAGACAACTGATTGGCTGGTGTCTGAGTTGCGTAAGATGGTGTCCATTTCGGGCAATCCGATTCAGCGACTGGGAGCATACATATTGGAGTCCTTTGTTGCAAGGATCGGTGCTTCAGGAAGCACAATCTACAAATCCTTGAAATGTAGTGAGCCTACTGGTAATGAACTACTTTCTTACATGAATGTGCTTTATGAAATTTGTCCATACTTCAAGTTTGGTTACATGTCGGCAAATGGAGCAATTGCTGAAGCTCTGAGGGAGGAAAGTGAAGTCCACATAGTTGACTTTCAGATTGGCCAGGGAACCCAGTGGGTGAGCCTGATTCAAGCTCTTGCTCGCCGCCCTGTAGGCCCCCCGAAGATCCGAATATCAGGTGTTGATGACTCCTATTCGGCCTATGCCAGGAGAGGAGGGCTTGATATTGTTGGGAAAAGGTTATCCGCACTTGCACAGTCATGTCATGTACCCTTTGAGTTCAATGCTGTAAGAGTACCTGTTACTGAGGTGCAACTTGAAGACCTTGAACTTCGCCCTTATGAAGCTGTGGCAGTGAACTTTGCCATTAGTCTGCACCATGTGCCAGATGAAAGTGTGAACAGTCACAATCATCGTGACCGATTGTTGAGATTAGCTAAGCAACTGTCTCCTAAGGTGGTGACTCTGGTTGAGCAGGAATTCAGCACCAACAATGCGCCGTTCTTGCAGCGCTTCGTTGAGACAATGAACTACTACTTGGCTGTTTTTGAATCAATCGATACTGTTCTTCCAAGGGAGCACAAAGAGAGGATTAATGTGGAGCAGCATTGTTTGGCTCGCGAAGTTGTCAACTTAATAGCATGTGAAGGAGAAGAAAGAGTTGAACGTCACGAGCTTCTGAATAAGTGGAGAATGCGTTTCACAAAGGCTGGATTTACACCTTATCCATTGAGCTCCGTTATTAATTCTTCAATCAAGGATCTTCTGCAGAGCTACCATGGACACTACACTCTAGAAGAGAGAGATGGTGCACTATTTCTTGGTTGGATGAATCAAGTTCTTGTTGCATCTTGTGCTTGGAGATGA 1638 0.4371 MQTPQNHKISYGSGGFYVEPVQNLDSYCIPSSENIDNYSSSDNSSQTTYPSVQTLEQYCTLESASTGNSFPSQNSPPALSFSSNNSLLSKLESNSYVLRPQHSLEIASGSPEDDSYLTHDLDGLTHKIRELETAMLGPNADMLDIYGTVIPEPDSFLLEAEKWKKMMEISCRGDLKEMLYMCAKAMAVNDMETTDWLVSELRKMVSISGNPIQRLGAYILESFVARIGASGSTIYKSLKCSEPTGNELLSYMNVLYEICPYFKFGYMSANGAIAEALREESEVHIVDFQIGQGTQWVSLIQALARRPVGPPKIRISGVDDSYSAYARRGGLDIVGKRLSALAQSCHVPFEFNAVRVPVTEVQLEDLELRPYEAVAVNFAISLHHVPDESVNSHNHRDRLLRLAKQLSPKVVTLVEQEFSTNNAPFLQRFVETMNYYLAVFESIDTVLPREHKERINVEQHCLAREVVNLIACEGEERVERHELLNKWRMRFTKAGFTPYPLSSVINSSIKDLLQSYHGHYTLEERDGALFLGWMNQVLVASCAWR* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2696 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 544 IPR005202 -
Gso8g2696 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
Gso8g2696 545 Pfam GRAS domain family 176 545 IPR005202 -
Gso8g2696 545 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 17 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2696 Gso-Chr8 44622951 44626418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2696 1 545 GRAS Transcription Factor Family AT1G50600 55.072 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso8g2696 GRAS 3.9e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2696 - - gmx:100805672 1046.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2696 8 44622951 44626418 Gso8g2696 8 44622951 44626418 ECH
Gso18g0686 18 7796568 7800105 Gso8g2696 8 44622951 44626418 GST
Gso8g2696 8 44622951 44626418 Gso14g0136 14 1197385 1200720 PCT
Gso8g2696 8 44622951 44626418 Gso2g2529 2 49666919 49670195 PCT
Gso14g0136 14 1197385 1200720 Gso8g2696 8 44622951 44626418 PCT
Gso2g2529 2 49666919 49670195 Gso8g2696 8 44622951 44626418 PCT