Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2695 ATGGACGCCGGCGAAGCCCTCTCCGACGATCCGAATCGGCCCAATTCCGCCGCCGACGCAGCTCCGGCCCCCGCGGGAGCAAGGTACAAGCTCCTGTCGCCGGCTAAGCTCCCGATCTCCCGCTCCCCGTGCGTCACGATTTCGCCGGGGCTCAGTCCGACGTCGTTTCTCGAGTCGCCGGTGCTGCTCTCCAACATGAAGGTGGAACCTTCACCGACTACAGGGTCGCTTTCTTTGCTTCATCAAACAGCATATGGTTCCATGACTTCTGCTGCATCTGCTACATTTCCTGTAACCACTGTGTGCTTCAATAGCAATACCGTTGATGAGAGAAAACCTAGCTTCTTTGAGTTTAAACCACACAGTGGATCAAATATGGTTCCCGCAGACTTTGACAACCATGCAAGTGAAAAATCTACTCAAATAGACAGTCAAGGAAAAGCTCAAGCTTTTGATTCATCAGCCTTAGTAAAAAATGAGTCAGCATCCCCTTCAAATGAATTAAGTCTATCATCGCCTGTTCAAATGGATTGCTCAGGAGCTAGTGCCCGTGTTGAAGGTGATTTGGATGAATTGAACCCTAGGAGCAACATAACAACTGGGCTTCAAGCATCACAAGTTGACAATAGAGGTAGTGGACTTACCGTTGCAGCTGAGCGAGTATCTGATGATGGATACAACTGGAGAAAATATGGGCAAAAACATGTTAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCTAACTGTGAAGTTAAGAAACTATTTGAACGCTCCCATGATGGACAAATCACTGAGATAATTTACAAGGGAACACATGATCATCCTAAACCTCAACCAAACCGCCGTTACTCTGCAGGAACTATAATGTCTGTGCAAGAAGACAGATCTGATAAAGCTTCTTTGACTAGCCGAGATGACAAAGGATCCAATATGTGTGGCCAGGGGTCTCACCTGGCTGAGCCCGACGGTAAACCAGAGTTATTGCCTGTAGCAACAAATGATGGTGATCTAGATGGTTTGGGGGTTTTGTCAAACCGGAATAATGATGAGGTTGATGATGATGATCCCTTCTCAAAGCGAAGAAAAATGGACGTTGGAATTGCTGACATCACTCCTGTAGTTAAGCCTATCCGGGAGCCACGTGTTGTTGTACAAACTCTGAGTGAGGTTGATATCTTGGATGATGGCTATCGCTGGCGCAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACGAACACCGGTTGCCCCGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCAAAAGCTGTGATTACCACGTATGAGGGGAAACACAATCATGATGTACCAACTGCAAGGAATAGTTGCCATGACATGGCAGGACCAGCAAGTGCAAGTGGACAGACAAGAGTTAGGCCCGAAGAAAGTGATACCATCAGCCTTGACCTTGGGATGGGAATTAGCCCAGCTGCCGAAAACACATCAAACAGTCAAGGGAGAATGATGCTTTCTGAATTTGGGGATAGTCAAATTCACACCAGCAATTCCAATTTCAAGTTCGTTCATACCACGACCGCGCCGGGGTACTTTGGTGTTCTAAATAACAACTCTAACCCATATGGTTCTAAAGAAAATCCAAGTGATGGTCCATCTTTAAACCATTCTGCTTATCCTTGCCCTCAGAACATAGGGAGAATACTAATGGGTCCTTGA 1734 0.466 MDAGEALSDDPNRPNSAADAAPAPAGARYKLLSPAKLPISRSPCVTISPGLSPTSFLESPVLLSNMKVEPSPTTGSLSLLHQTAYGSMTSAASATFPVTTVCFNSNTVDERKPSFFEFKPHSGSNMVPADFDNHASEKSTQIDSQGKAQAFDSSALVKNESASPSNELSLSSPVQMDCSGASARVEGDLDELNPRSNITTGLQASQVDNRGSGLTVAAERVSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPNRRYSAGTIMSVQEDRSDKASLTSRDDKGSNMCGQGSHLAEPDGKPELLPVATNDGDLDGLGVLSNRNNDEVDDDDPFSKRRKMDVGIADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNTGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNSCHDMAGPASASGQTRVRPEESDTISLDLGMGISPAAENTSNSQGRMMLSEFGDSQIHTSNSNFKFVHTTTAPGYFGVLNNNSNPYGSKENPSDGPSLNHSAYPCPQNIGRILMGP* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2695 577 MobiDBLite consensus disorder prediction 343 362 - -
Gso8g2695 577 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 557 IPR044810 GO:0003700
Gso8g2695 577 MobiDBLite consensus disorder prediction 134 174 - -
Gso8g2695 577 MobiDBLite consensus disorder prediction 1 24 - -
Gso8g2695 577 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 14 557 - -
Gso8g2695 577 SUPERFAMILY WRKY DNA-binding domain 219 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g2695 577 MobiDBLite consensus disorder prediction 295 328 - -
Gso8g2695 577 Gene3D WRKY domain 382 458 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g2695 577 Gene3D WRKY domain 213 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g2695 577 ProSiteProfiles WRKY domain profile. 392 457 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g2695 577 MobiDBLite consensus disorder prediction 544 565 - -
Gso8g2695 577 SUPERFAMILY WRKY DNA-binding domain 389 457 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g2695 577 Pfam WRKY DNA -binding domain 223 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g2695 577 Pfam WRKY DNA -binding domain 398 454 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g2695 577 ProSiteProfiles WRKY domain profile. 217 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g2695 577 SMART WRKY_cls 222 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g2695 577 SMART WRKY_cls 397 456 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g2695 577 MobiDBLite consensus disorder prediction 127 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2695 Gso-Chr8 44611966 44617910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2695 32 577 WRKY Transcription Factor Family AT4G26640 55.856 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso8g2695 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2695 - - gmx:100127383 1146.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2695 8 44611966 44617910 Gso8g2695 8 44611966 44617910 ECH
Gso18g0687 18 7801758 7807775 Gso8g2695 8 44611966 44617910 GST
Gso8g2695 8 44611966 44617910 Gso14g0138 14 1204617 1210161 PCT
Gso8g2695 8 44611966 44617910 Gso2g2527 2 49651039 49656880 PCT
Gso14g0138 14 1204617 1210161 Gso8g2695 8 44611966 44617910 PCT
Gso2g2527 2 49651039 49656880 Gso8g2695 8 44611966 44617910 PCT