Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2687 ATGGGTATCTCTCGCGATTCCATGCACAAGAGGCGCGCCACCGGCGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGGAGGCAGCCAGCAAACACAAAGCTATCAAGCAACAAGACGGTGAGGAGGATTAGGGTTCGCGGTGGAAACGTGAAGTGGCGTGCTTTGAGGCTTGATACCGGGAACTACTCTTGGGGGAGTGAGGCTGTGACCCGCAAGACAAGGATTCTTGATGTTGTGTACAATGCATCCAACAATGAGCTTGTTCGGACTCAGACGCTGGTCAAGAGTGCCATTGTTCAGGTCGATGCAGCGCCCTTCAAGCAGTGGTATCTGCAGCATTATGGCGTTGAGGTTGGCCGCAAGAAGAAGAGTGCAGCAGCTTCTGTCAAGAAGGAAGGGGAGGATGGTGAAGCTGCAACTGAGGAGGTGAAGAAGAGTAACCATGTTGTGAGAAAATTGGAAAAGCGAAAGCAGAACCGGGTGCTTGATCCTCACATTGAAGAACAATTTGGAGGTGGTCGCCTTTTGGCTTGTATCTCATCTCGACCTGGCCAATGTGGCCGTGCTGATGGATATATATTAGAGGGCAAAGAGCTGGAATTTTACATGAAGAAGCTTCAGAAGAAGAAGGGCAAGGGTGCTGCTTAA 660 0.5045 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEVGRKKKSAAASVKKEGEDGEAATEEVKKSNHVVRKLEKRKQNRVLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2687 219 MobiDBLite consensus disorder prediction 1 40 - -
Gso8g2687 219 TIGRFAM eS8: ribosomal protein eS8 1 200 IPR001047 GO:0003735|GO:0005840|GO:0006412
Gso8g2687 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 219 - -
Gso8g2687 219 MobiDBLite consensus disorder prediction 11 26 - -
Gso8g2687 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 219 IPR001047 GO:0003735|GO:0005840|GO:0006412
Gso8g2687 219 Gene3D - 32 162 - -
Gso8g2687 219 CDD Ribosomal_S8e_like 5 198 - -
Gso8g2687 219 Pfam Ribosomal protein S8e 5 198 IPR022309 -
Gso8g2687 219 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Gso8g2687 219 Gene3D - 163 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2687 Gso-Chr8 44524726 44527298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2687 1 207 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.575 1.85e-126 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2687 K02995 - gmx:100803006 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2687 8 44524726 44527298 Gso8g2687 8 44524726 44527298 ECH
Gso18g0710 18 8220964 8223458 Gso8g2687 8 44524726 44527298 GST