Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2680 ATGGGTATGGTGCCAGTGAATTTGATTCCTGAGGTATTGAGGAATTTGGTTCATGAGCACGCACTAGTGGTGCCCATATCACTCTTTGTAGCGGTTCTCTGCCTCTGCTTGGTCGTTGGTCACTTGCTTGAAGAAAATCGATGGATTAATGAATCCATTCTTGCCATTATAGTAGGATTCATTGCTGGAATTATACTGTTATTAGTCACCAAAGGGAAGAGTTCTCACATCCTTACATTTAATGAAGAACTATTCTTCATATATCTCCTTCCTCCCATAATATTCAATGCAGGATTTCAGGTGAAGAAGAAACAGTTCTTCCATAACTTCTTAACCATCATGCTGTTTGGGGTGATCGGTGTTTTTATTTCAGTGTCGATTATTACATGCGGCAGCTGGTGGTTGTTCCCCAAGTTGAAGTTGCTTGGCCTATCTGGGCAAGATTATCTCGCTATAGGAACAATTTTCTCGTCAACGGACACGGTTTGCACACTGCAGGTTCTCCATCAAGATGAAACTCCTTTACTATACAGCCTAGTCTTTGGGGAAGGAGTGGTAAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTGCAAAAGCTTGATGTTTCAAGATTAAGTGGCAAGACGTTCAGTGTTATTGGAGAATTCTTGTATCTATTTATAACAAGCACTGGTCTTGGAGTTATAACTGGCCTTCTCACAGCATATATCTTGAAAGCCTTAAGCTTTGGAAGACATTCAAGTGTTCGTGAAATTTCCTTGATGATCTTAATGGCATACCTATCCTACATGTTGGCAGAGCTATTCGATCTAAGTGGAATCCTCACCGTTTTCTTTTGTGGAATACTAATGTCACATTATGCATGGTATAATGTGACTGAAACTTCAAGAATCACAACCAGGCATGTGTTTGCAACAATGTCATTTATTGCAGAAACCTTCATATTTCTATATGTGGGCATGGATGCCCTTGACATTGAGAAGTGGAAGATGACCCAATTAAGTTATGGAAATTTGATGGGGATATACAGTTCCTTAATCCTATTGATATTGCTTGGGCGGGCAGCATTTGTTTTCCCTCTCTCTGCTCTGGCCAATTATACGAACACACGTGCTACTTCTGACCAAGCCTCAAGTATCACATTCAAACATCAGATAATCATTTGGTGGGCTGGGCTAATGAGGGGAGCTGTCTCCATTGCTCTGGCTTTCAAACAGTTCACGTTTTCTGGAGTTACTACTGATCCAGTTAATGCAACAATGATTACCAACACCATTATTGTTGTCCTATTCAGCACACTGGTGTTTGGTTTTCTCACAAAACCACTAATTAGATATCTGCTTCCCCACAGTGCAACAAGGAAAAGCATCAGCCATTCAGAATCAGGTCCACCATTTGACGACTTGAATCTTCCTTTCCTATCCCTTGAGGAGTCAGCAGCGACCAACATCAGCCGCGCAAAGGCAAGTTTGTCCATGTTGATAGAAAGTCCTGTGTTCACCATACATCGCTATTGGAGGAGGTTCGATGATGCCTACATGAGACCTATATTTGGGGGACCTCACGGTAACCAGTCACAGTGCTAG 1590 0.4176 MGMVPVNLIPEVLRNLVHEHALVVPISLFVAVLCLCLVVGHLLEENRWINESILAIIVGFIAGIILLLVTKGKSSHILTFNEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISVSIITCGSWWLFPKLKLLGLSGQDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSRLSGKTFSVIGEFLYLFITSTGLGVITGLLTAYILKALSFGRHSSVREISLMILMAYLSYMLAELFDLSGILTVFFCGILMSHYAWYNVTETSRITTRHVFATMSFIAETFIFLYVGMDALDIEKWKMTQLSYGNLMGIYSSLILLILLGRAAFVFPLSALANYTNTRATSDQASSITFKHQIIIWWAGLMRGAVSIALAFKQFTFSGVTTDPVNATMITNTIIVVLFSTLVFGFLTKPLIRYLLPHSATRKSISHSESGPPFDDLNLPFLSLEESAATNISRAKASLSMLIESPVFTIHRYWRRFDDAYMRPIFGGPHGNQSQC* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2680 529 PANTHER SODIUM/HYDROGEN EXCHANGER 14 526 - -
Gso8g2680 529 Gene3D - 145 197 - -
Gso8g2680 529 PANTHER SODIUM/HYDROGEN EXCHANGER 14 526 IPR018422 GO:0006812|GO:0015299|GO:0016021
Gso8g2680 529 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso8g2680 529 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso8g2680 529 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso8g2680 529 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso8g2680 529 Pfam Sodium/hydrogen exchanger family 29 445 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2680 Gso-Chr8 44461573 44467578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2680 6 529 Antiporters AT5G55470 70.321 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2680 - - gmx:100813332 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2680 8 44461573 44467578 Gso8g2680 8 44461573 44467578 ECH