Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2668 ATGGCATCTTCAGACTCATGGATGAAGGAATATAATGAAGCTGTGAAACTTGCTGATGATATCAATGGCATGATTTCTGAACGTAGTTCGTTTCCTGCATCTGGACCAGAAACCCAGCGACATGCATCTGCTATAAGAAGGAAGATCACGATATTAGGGACCAGACTTGATAGCTTGCAATCTCTGTTGTCAAAGGTCCCTGCAAAAACTGAGAAGGAGATGAATCGTCGAAAGGACATGCTTGCAAATTTGAGGACAAAAGTTAACCAAATGGCTTCAACATTGAACATGTCTAACTTTGCAAATAGGGATAGTTTGCTAGGGCCAGAAATAAAATCAGATGCAATGAGCAGAACTGTTGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGAGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAACATATTGCATTGGCTGTGAATGAAGAGCTGAATCTACATACCAGACTCATTGATGACTTGGACCAACATGTAGATGTTACAGATTCTCGGCTGAGGAGAGTGCAGAAGAACTTGGCAGTGTTAAACAAACGTACCAAGGGTGGTTGCTCCTGCTTGTGCATGCTTTTATCAGTGATTGGTATAGTGGGTTTGGTGGTTGTCATATGGCTGTTGGTCAAATATTTGTAA 687 0.4192 MASSDSWMKEYNEAVKLADDINGMISERSSFPASGPETQRHASAIRRKITILGTRLDSLQSLLSKVPAKTEKEMNRRKDMLANLRTKVNQMASTLNMSNFANRDSLLGPEIKSDAMSRTVGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELNLHTRLIDDLDQHVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLSVIGIVGLVVVIWLLVKYL* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2668 228 SUPERFAMILY SNARE fusion complex 123 193 - -
Gso8g2668 228 Gene3D - 134 196 - -
Gso8g2668 228 PANTHER SYNTAXIN 1 223 IPR045242 -
Gso8g2668 228 Pfam SNARE domain 169 220 IPR000727 -
Gso8g2668 228 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 132 194 IPR000727 -
Gso8g2668 228 SMART tSNARE_6 127 194 IPR000727 -
Gso8g2668 228 CDD SNARE_Qc 135 192 - -
Gso8g2668 228 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2668 Gso-Chr8 44361169 44365680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2668 2 228 SNARE and Associated Proteins AT1G16240 72.609 1.17e-123 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2668 K08503 - gmx:100799465 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2668 8 44361169 44365680 Gso8g2668 8 44361169 44365680 ECH
Gso18g0737 18 8782237 8786900 Gso8g2668 8 44361169 44365680 GST
Gso8g2668 8 44361169 44365680 Gso14g0151 14 1312690 1315147 PCT
Gso14g0151 14 1312690 1315147 Gso8g2668 8 44361169 44365680 PCT