Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2650 ATGTATAAAAAATTAACTAGCAAAATGGAAGCTACCTGCAATGATATCTCTAATGTTGCAGTTACACAGTCTTCTCCAACGATGTCGTTTAATGGGAAACGACTTGTCGTGGATGAGATAGATTTCTTCGCAGAGAAGAAGAAAAAGAAAAGTGAAGTTGATGATCAAATGGTGCATCACCAAATGGAGCTTCCTAATACTAGTTTAGATCTCCTTATTACAAATAGTACTTCAACGAGCAATAGATCAAATATGGAAGAAGAACCGTCCAAGGCAAAGGATAATACCAGAAATAAGTTTGTAGCTATGCTATCTGAGTTGCAGCAGATGAATGCTGAAAATCGACGCTTGAGAGAGCTGGTTCATAATCTGAATAATAAGTACAATGCCCTGCACAAGGATCTTATGAAACTTACGCATAAACAACATGAAAATGAGATTAATGGAGCCATAAAGGAGAATGATAAGAGAGATGATATGATTATTCCAAGGTCTTTGTTGGATATTGGAATTGCTACAAAGGAAGATCCTTCACAGCAACATTATTCAGAACGAAAACTGCAAGAAAGCAAAAACATTATTGACAAGTTGGATTCTGGCAAGGATAGTGAAAAATCTATGGTAGATCAGCATGAGAGTCCAGCTGATCACAAAGCTCTTTGGGGGTGGATCTCAACTGAAGCAACAAGATTGAGTTCTTTGAGGGATGTTGATCAAGCATCAGAAACCATGTCAATGATCAAGAAAGCTCGTGTATCAGTTCGTGCAAGAACAGATTCATCTATGATATCAGATGGATGTCAATGGAGAAAGTATGGACAGAAGATGGCAAAAGGAAATCCATGTCCGCGATCTTATTATCGTTGCTCAATGGGGACTGCTTGTACAGTTCGGAAGCAAGTACAAAGGAGTGCTGAGGATCAAAGTGTATTGATCACAACATATGAAGGACAGCATAATCATGTACTCTCTCCCACTGCCAGGGCAATGGCATCCACCACATCAGCAGCTGCATCAATGCTTCTTTCAGGATCAATGCTAAGCTCAGATGGCCTTATTCACCCAAACATATTGGAAAGTACTGCAGCACTTTCATGCTCACAGAACACAGCAACCCTCTCAGCTTCAGCTCCATTTCCAACTATAACTTTGGATCTCACTCAAAGTGCTACCAATAATTCCTCACAGCTACTACAAGGAGCACCACAAGATAACCAACATAGCCTCCTTTCCCCAGTTTTGGCTCAGAAGTTTATGTCATCAGCTACAAACATTTTTGACCAGGGAACAGAAACTGCTTCATTTGTGGACACGGTAAATGCAGCAACAGCTGCTATCACTGCGGACCCGAAATTCAGTGCAGCTCTTATGGCTGCCGTAACATCTATTATTGGAAGTTCACATTCAAACATTAATGGTACTAGTGGAGATATCCAACATGGCAATAACAATTAA 1455 0.4014 MYKKLTSKMEATCNDISNVAVTQSSPTMSFNGKRLVVDEIDFFAEKKKKKSEVDDQMVHHQMELPNTSLDLLITNSTSTSNRSNMEEEPSKAKDNTRNKFVAMLSELQQMNAENRRLRELVHNLNNKYNALHKDLMKLTHKQHENEINGAIKENDKRDDMIIPRSLLDIGIATKEDPSQQHYSERKLQESKNIIDKLDSGKDSEKSMVDQHESPADHKALWGWISTEATRLSSLRDVDQASETMSMIKKARVSVRARTDSSMISDGCQWRKYGQKMAKGNPCPRSYYRCSMGTACTVRKQVQRSAEDQSVLITTYEGQHNHVLSPTARAMASTTSAAASMLLSGSMLSSDGLIHPNILESTAALSCSQNTATLSASAPFPTITLDLTQSATNNSSQLLQGAPQDNQHSLLSPVLAQKFMSSATNIFDQGTETASFVDTVNAATAAITADPKFSAALMAAVTSIIGSSHSNINGTSGDIQHGNNN* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2650 484 Gene3D WRKY domain 248 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g2650 484 ProSiteProfiles WRKY domain profile. 258 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g2650 484 SUPERFAMILY WRKY DNA-binding domain 256 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g2650 484 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 21 471 - -
Gso8g2650 484 SMART WRKY_cls 263 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g2650 484 Pfam WRKY DNA -binding domain 265 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g2650 484 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 21 471 IPR044810 GO:0003700
Gso8g2650 484 Coils Coil 93 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2650 Gso-Chr8 44155738 44160971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2650 34 483 WRKY Transcription Factor Family AT1G62300 39.837 8.52e-89 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso8g2650 WRKY 1.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2650 - - gmx:100804246 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0755 18 9171333 9175373 Gso8g2650 8 44155738 44160971 GST
Gso8g2650 8 44155738 44160971 Gso2g2490 2 49348312 49350713 PCT
Gso2g2490 2 49348312 49350713 Gso8g2650 8 44155738 44160971 PCT