Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2642 ATGCAGAAATTGCAAGAAATTGCAGTGTCCTTGGCTGTTGATTATTTGCTTCCACCCTTAAAGAAAGCAGTGAATTCAGTCATGGAGGTTCCAAAAGATGCCGCAGACATGAAAGACAAACTTGATGAGATTCAAGCCATGATTCATGATGTGGACAAGATGGCAGCAGCTGAAGAAGGCAACTCACGTGATGGTCTAAAGGCAAAGGTGAAGCAGCTGGTGGAAACATCTTTTTGTATGGAAGATATCGTTGATGAATACATTATCCATGAGGAAAGGCAGCTTGCTCATGATCCCGGATGTGCATCTTTACCTTGTAAGGCAATTGATCTCGTCAAAACTACGGCCTCTCGTCTTCAATTTGCATACTTGAACCAGGACGTGAAATCAGAATTTCGTGGGATCAAGGAGAGGAACAAAAGTGAGGATTGCTCCCAAATTCAATCTCCTGGAGGACCCCAAAACATCACGTTTGACAACCTTCGAATGGCTCCTATGTTTCTTAAGGAGGCTGAGGTGGTGGGCTTTGACAGCCCTAGACACACATTGGAAAGATGGTTGAAAGAGGGGCGGAAAAAGCTCACTGTTATCTCTGTGGTAGGAATGGGAGGAAGTGGAAAAACTACTCTTGCCAAGAAAGTTTTTGACAAAGTCCAGACACACTTCACTCGCCATGTCTGGATCACAGTGTCTCAGTCATATACCATAGAAGGATTGCTGCTCAAGTTTCTGGAAGCAGAAAAAGAAAAGGATCCTTCTCAGAGAGTTTATTCTACAATGGATAAAGCATCGTTGATACATGAGGTGAGAAATCACTTGAGCTGCAATAGTTATGTTGTCGTGTTTGATGACGTGTGGAATGAAAATTTTTGGGAGGAAATGAAATTTGCTTTAGTTGATGTTGAAAATGGAAGTAGGATAATAATCACAACCAGGCACCGTGAGGTTGCAGAGTCTTGTAGGACATCTTCTCTTGTTCAAGTGCATGAGTTGCAACCTTTAACTGATGACAAATCTTTCGAATTGTTTTGTAAAACGGCATTTGGATCTGAATTAGATGGGCATTGTCCAAACAATCTTAAGGACATATCAACTGAAATTGTTAAAAAGTGTGGAGGTTTACCACTAGCTATTGTGGCCACTGGTGGCCTTTTATCTCGTAAAAGTAGAGATGCACGTGAATGGCAAAGATTTAGTGAGAATCTAAGTTCAGAATTAGGAAAGCATCCCAAATTAACTCCCGTGACAAAGATTTTGGGTTTAAGTTATTATGATTTGCCTTACCATCTCAAACCATGCTTCTTGTATTTCGGAATATATCCGGAAGATTATGAAGTTGGGTGTGGGAGATTGATTCGACAATGGGTAGCTGAGGGGTTTGTCAAATCTGATGAAGCGGCACAGACTTTAGAAGAAGTGGCAGAAAAATATTTGAATGAGTTGATCCAAAGAAGTTTGGTTCAAGTATCTTCATTTTCAAGGTTTGGCAAAATTAAAAGTTGTCGTGTTCATGACGTGGTACGTGAAATGATCCGCGAGAAGAATCAAGATTTAAGCGTTTGTCATTCGGCTAGTGAGCGCGGGAACTTGTCCAAAAGTGGGATGATTCGTCGCCTAACAATAGCATCTGGTTCCAACAATTTGACGGGAAGTGTTGAAAGCTCCAACATTCGATCACTTCATGTTTTCAGTGATGAAGAATTGTCAGAATCCTTGGTGAAGAGTATGCCTACAAAGTACAGGTTATTAAGGGTACTTCAATTTGAAGGTGCTCCAATGTATGATTATGTTCCGCCCATTGAAAGTTTGGGGGATTTATCATTTTTGAGGTACTTAAGCTTCAGAAGAAGTTCGAAGATAGTCCATCTTCCAAAATTAATTGGTGAGCTGCACAACCTAGAAACATTGGATCTAAGATACACTGGTGTGCGTAAGATGCCAAGAGAGATCTACAAGCTTAAAAAGTTAAGACACCTGAATGGTTATTATGGGTTTAAAATGGATAGTGGCATTGGAGATCTAACATCCCTACAAACACTACGTGGAGTGGACATAAGCCATAATACAGAAGAAGTAGTAAAAGGGTTGGAAAAACTTACACAATTAAGGGTGTTGGGCTTGAGAGAAGTTGAGCCAAGATTCAAAAGTTTTCTGTGCTCCTTGATAAACAAGATGCAACACCTGGAGAAGTTATATATTACTTCAAGAGATGGTAGTACCTATGGGAAGATGGATTTGCATTTTGATGTATTTGCACCTGTACTTCAGAAGGTTAGTCTTATGGGGCGGTTAAAGAAGTTCCCAAACTGGGTTGCCAAGCTCCAAAATCTTGTTACGTTGTCCTTGTCATTCACCCAGTTGACACATGATCCATTGCCACTACTTAAAGATCTACCAATTTTGACGCACCTTTGTATCCACCATATTGCATACGATGGTGAAGTTTTGCAGTTTCCAAACAGGGGGTTTCCGAACCTAAAGCAAATACTACTGTTACATTTGTTTCCATTGAAATCCATCGTTATTGAAGATGGAGCATTGCCTTCTCTCGAAAAGCTCAAGTTAAAATTTATTCCCCGACTGACAGAGGTGCCTCGTGGTATTGACAAGTTACCAAAGCTTAAGGTTTTCCATTGTGTTGATATGTCAGATGAATTTAAAGAAAGCTTTAATCTCAACAGAGGACAACGTCGTCAATGGATAATAGAATGA 2712 0.4038 MQKLQEIAVSLAVDYLLPPLKKAVNSVMEVPKDAADMKDKLDEIQAMIHDVDKMAAAEEGNSRDGLKAKVKQLVETSFCMEDIVDEYIIHEERQLAHDPGCASLPCKAIDLVKTTASRLQFAYLNQDVKSEFRGIKERNKSEDCSQIQSPGGPQNITFDNLRMAPMFLKEAEVVGFDSPRHTLERWLKEGRKKLTVISVVGMGGSGKTTLAKKVFDKVQTHFTRHVWITVSQSYTIEGLLLKFLEAEKEKDPSQRVYSTMDKASLIHEVRNHLSCNSYVVVFDDVWNENFWEEMKFALVDVENGSRIIITTRHREVAESCRTSSLVQVHELQPLTDDKSFELFCKTAFGSELDGHCPNNLKDISTEIVKKCGGLPLAIVATGGLLSRKSRDAREWQRFSENLSSELGKHPKLTPVTKILGLSYYDLPYHLKPCFLYFGIYPEDYEVGCGRLIRQWVAEGFVKSDEAAQTLEEVAEKYLNELIQRSLVQVSSFSRFGKIKSCRVHDVVREMIREKNQDLSVCHSASERGNLSKSGMIRRLTIASGSNNLTGSVESSNIRSLHVFSDEELSESLVKSMPTKYRLLRVLQFEGAPMYDYVPPIESLGDLSFLRYLSFRRSSKIVHLPKLIGELHNLETLDLRYTGVRKMPREIYKLKKLRHLNGYYGFKMDSGIGDLTSLQTLRGVDISHNTEEVVKGLEKLTQLRVLGLREVEPRFKSFLCSLINKMQHLEKLYITSRDGSTYGKMDLHFDVFAPVLQKVSLMGRLKKFPNWVAKLQNLVTLSLSFTQLTHDPLPLLKDLPILTHLCIHHIAYDGEVLQFPNRGFPNLKQILLLHLFPLKSIVIEDGALPSLEKLKLKFIPRLTEVPRGIDKLPKLKVFHCVDMSDEFKESFNLNRGQRRQWIIE* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2642 903 Gene3D - 164 329 IPR027417 -
Gso8g2642 903 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 437 IPR027417 -
Gso8g2642 903 PANTHER - 32 886 - -
Gso8g2642 903 Gene3D - 333 422 IPR042197 -
Gso8g2642 903 PANTHER DISEASE RESISTANCE PROTEIN RP 32 886 IPR044974 GO:0006952
Gso8g2642 903 Pfam Rx N-terminal domain 8 94 IPR041118 -
Gso8g2642 903 Pfam NB-ARC domain 185 423 IPR002182 GO:0043531
Gso8g2642 903 Gene3D - 423 516 IPR036388 -
Gso8g2642 903 PRINTS Disease resistance protein signature 196 211 - -
Gso8g2642 903 PRINTS Disease resistance protein signature 272 286 - -
Gso8g2642 903 PRINTS Disease resistance protein signature 371 385 - -
Gso8g2642 903 PRINTS Disease resistance protein signature 628 644 - -
Gso8g2642 903 SUPERFAMILY L domain-like 502 881 - -
Gso8g2642 903 Gene3D - 7 122 - -
Gso8g2642 903 Gene3D Ribonuclease Inhibitor 551 740 IPR032675 -
Gso8g2642 903 Gene3D Ribonuclease Inhibitor 741 897 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2642 Gso-Chr8 44086078 44089946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2642 172 390 WRKY Transcription Factor Family AT5G45050 28.767 4.18e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2642 K13457 - gmx:100802130 1776.91