Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2639 ATGAAGAAGATGTGGGTTTCGGATCATAGGTTGTTTCTTCTCTGCATTCTTTGTGGCCTCTGTTTTTGTCTGCAGTTCACAACGGGTCATGCAGGTTCAAATGCTGGAAGAACTTTGAATCAGGAGGGTGGTGATCATCAAATACATTGCTCTAGAGAAAGAAGTAGAACAGCTTGGAAGATCATTCAAGAGTATTTGATGCCATTTGTGGAGAAAGAAAAATACCACATCTCAAAAAGGTGTATGCTTCACCCTGACAATGACATATACAGAGATCAGGAGCAACATAAGTCTCATATAGATATAAACGAATGGCAGTGTAGGTACTGTAAGAAAAGTTTCTATGAAGAGAAACATCTTGATCAGCATTTTGACAACAGACACTCCAATTTGCTTAATTTGAGTGAAAGCCAGTGCTTAGCAGATGTTTGTGGTGCTCTGCACTGTGACCATGAAATGAATTCTGGATCTAAAAAATCAAAGTGCAATCCTGCTGCTGCTGCAAAACATAAACATCTATGTGAGAGCTTAGCCGATAGTTGTTTTCCTGTCAGTGATGGCCCTGCAGCAAGCCAACTTCATGAATTCTTCTTGCACCAATTCTGTGATGCACACAGCTGCACTGGAAGTAGGAAACCTTTCTCCAGAGGGCACAGGAAGAAGACAAATGTGTTCTACATCTTTGTGTCTATTTTGCTTGTGATACTGCTGCTACTATACTATCTCTACATTTACTTATATCAGAGAGGAATGAAAAGAGAAACTCAAGTGCTGAAGCGCATCTCACAAGCCAGCAGAAAGAAAAAGCCATCTTAA 816 0.4032 MKKMWVSDHRLFLLCILCGLCFCLQFTTGHAGSNAGRTLNQEGGDHQIHCSRERSRTAWKIIQEYLMPFVEKEKYHISKRCMLHPDNDIYRDQEQHKSHIDINEWQCRYCKKSFYEEKHLDQHFDNRHSNLLNLSESQCLADVCGALHCDHEMNSGSKKSKCNPAAAAKHKHLCESLADSCFPVSDGPAASQLHEFFLHQFCDAHSCTGSRKPFSRGHRKKTNVFYIFVSILLVILLLLYYLYIYLYQRGMKRETQVLKRISQASRKKKPS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2639 271 ProSitePatterns Zinc finger C2H2 type domain signature. 107 128 IPR013087 -
Gso8g2639 271 ProSiteProfiles Zinc finger C2H2 type domain profile. 105 130 IPR013087 -
Gso8g2639 271 SUPERFAMILY Expressed protein At2g23090/F21P24.15 95 130 - -
Gso8g2639 271 PANTHER ZINC FINGER PROTEIN-RELATED 5 271 - -
Gso8g2639 271 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2639 Gso-Chr8 44053273 44057438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2639 27 271 C2H2 Transcription Factor Family AT5G63280 59.274 5.54e-105 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2639 - - gmx:100792257 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0778 18 9549708 9553954 Gso8g2639 8 44053273 44057438 GST