Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2600 ATGAGTTGTTTTCCTTGTTGTACATCACAAGAGAGGATCAACAAGAAATCATTGAAGAAGAGCATTAAGGAATACCATGAAGAAAAAATTCTAGCCTCATTTGCCAACATCTCTGTTAAAACAGATAGTGGCAAGCGAAATCTCATAACAAATGAGCTAGCAAAGCTTGGGAAAGGAAACATTACCTCTAAGATATTTCCATATCGTGAGCTATGTGTTGCAACTCAGAACTTTAACCCTGCCAATATGATTGGTGAAGGAGGCTTTGGGAGGGTATACAAAGGACACCTTAAAAGCACAAATCAAGTTGTTGCTGTGAAGCAACTTGACAGGAATGGATTTCAAGGGAACAGAGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTTTTGCACCACCCTAACCTTGTCAACTTGGTAGGGTATTGTGCTGAAGGTGAACATAGGATTTTGGTGTATGAATATATGATCAATGGCTCTTTAGAAGATCACTTACTTGAAATAACTCCGGATAGAAAACCTTTGGACTGGCAGACTAGAATGAAAATTGCAGAAGGTGCAGCAAAAGGACTTGAATATTTGCATGAACAAGCAAACCCACCAGTGATATACCGCGATTTCAAAGCATCAAACATACTGCTAGATGAAAACTTCAATCCAAAGCTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAACTGGAGACAAAACACATGTGTCCACAAGAGTGATGGGAACATATGGCTATTGTGCTCCCGAGTATGCATCAACCGGGCAATTGACTTCAAAATCAGATGTGTACAGTTTTGGAGTAGTGTTTTTGGAGATGATCACTGGAAGAAGAGTAATTGATAATGCAAGACCATCAGAAGAGCAAAACTTAGTCCTTTGGGCACAACCACTTCTAAGAGATAGAATGAAGTTTACACAAATGGCAGATCCATTGCTAGAAGATAACTACCCCATAAAGAGTCTATACCAAGCTCTAGCAGTAGCAGCAATGTGTCTCCAAGAGGAAGCTGATACTCGACCTTTGATCAGTGATGTAGTTACAGCCATTGAGTTTTTAGCAAGGAAGAAAGTAGAAGTGGATGAACCACGACATACAAAAGAAACTTCTTCCACTCAAGATGGAGATAGTAGTGAACACAATGAATCTGATGAAGAATCTGATGGCGAGGAAGACGATGAGAATGAAGATGAGGAGAAGGATAAGAACGTTGAAATCAACAAAAAAGAATGA 1239 0.3947 MSCFPCCTSQERINKKSLKKSIKEYHEEKILASFANISVKTDSGKRNLITNELAKLGKGNITSKIFPYRELCVATQNFNPANMIGEGGFGRVYKGHLKSTNQVVAVKQLDRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCAEGEHRILVYEYMINGSLEDHLLEITPDRKPLDWQTRMKIAEGAAKGLEYLHEQANPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTSKSDVYSFGVVFLEMITGRRVIDNARPSEEQNLVLWAQPLLRDRMKFTQMADPLLEDNYPIKSLYQALAVAAMCLQEEADTRPLISDVVTAIEFLARKKVEVDEPRHTKETSSTQDGDSSEHNESDEESDGEEDDENEDEEKDKNVEINKKE* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2600 412 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2600 412 SUPERFAMILY Protein kinase-like (PK-like) 64 368 IPR011009 -
Gso8g2600 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Gso8g2600 412 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Gso8g2600 412 Gene3D Transferase(Phosphotransferase) domain 1 155 380 - -
Gso8g2600 412 CDD STKc_IRAK 84 353 - -
Gso8g2600 412 Pfam Protein kinase domain 82 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2600 412 PANTHER OS07G0668900 PROTEIN 1 374 - -
Gso8g2600 412 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 374 - -
Gso8g2600 412 MobiDBLite consensus disorder prediction 362 412 - -
Gso8g2600 412 Gene3D Phosphorylase Kinase; domain 1 51 154 - -
Gso8g2600 412 MobiDBLite consensus disorder prediction 381 402 - -
Gso8g2600 412 MobiDBLite consensus disorder prediction 362 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2600 Gso-Chr8 43640055 43643488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2600 1 384 Glycoside Hydrolase AT3G07070 58.779 2.24e-162 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso8g2600 Pkinase 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2600 - - gmx:100790474 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2600 8 43640055 43643488 Gso8g2600 8 43640055 43643488 ECH
Gso8g2600 8 43640055 43643488 Gso14g0212 14 1859270 1862772 PCT
Gso8g2600 8 43640055 43643488 Gso2g2457 2 49089009 49092462 PCT
Gso14g0212 14 1859270 1862772 Gso8g2600 8 43640055 43643488 PCT
Gso2g2457 2 49089009 49092462 Gso8g2600 8 43640055 43643488 PCT