Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2592 ATGATCTCTTCATTGAGACAACCTGTTGTAGGGATCAGTGGTTCTGATCTTCTTTTGAGGCAAAGACATGCAACCCTAATTAAGGCAAGGTCCTTTTTACCCTCTTTGTCAAGAGAAAAGGGTCAAAGATCTCTTGTTTCAGTTCAAAAGCCACTTCACATTGCTGCTTCTCTTGGTGTTGGAAATTTTGTGTCAGTGAAGAGTGATGATGACAAAAGGGGTGATTTGGTGAAGTGTGAGGCCTATGAAGCAGACAGATCAGAGGTTGAGGGTGCAAGCACACCATCAGAAGCTGCAAAGAAGGTGAAAATTGGGATATATTTTGCAACCTGGTGGGCTTTGAATGTGGTGTTCAATATTTATAACAAGAAGGTTTTGAATGCTTACCCTTACCCTTGGCTTACTTCAACTCTCTCACTTGCATGTGGGTCTCTTATGATGTTGATCTCTTGGGCCACTGGGATTGCTGAAGCCCCAAAGACTGATCCTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCACATACAATTGGACATGTAGCGGCAACAGTTAGCATGTCAAAAGTTGCGGTATCATTCACACACATTATCAAGAGTGGTGAACCTGCTTTTAGTGTTCTGGTTTCAAGATTTCTTTTGGGTGAGAGCTTTCCTGTGCCAGTCTATCTGTCTTTAATTCCAATCATTGGTGGATGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAATATGATCGGTTTTATGGGGGCCATGATATCGAATTTGGCATTTGTATTCCGTAATATCTTTTCGAAAAAGGGCATGAAGGGAAAGTCTGTTAGTGGAATGAATTACTACGCATGTTTATCTATTTTATCTCTTGCTATTCTCACACCCTTCGCAATTGCTGTGGAAGGACCGCAAATGTGGGCTGCTGGATGGCAAACAGCCATGTCTCAAATTGGACCCCAATTCATATGGTGGCTAGCTGCTCAAAGTGTATTCTATCATCTATACAATCAAGTGTCATACATGTCTCTGGATCAGATCTCTCCTTTGACGTTTAGCATTGGAAACACCATGAAACGTATATCTGTCATTGTGTCTTCCATTATTATCTTCCACACACCAGTTCAACCCATCAATGCTCTTGGTGCCGCCATTGCTATCCTTGGAACCTTCTTGTATTCACAGGCGAAACTATAG 1188 0.4226 MISSLRQPVVGISGSDLLLRQRHATLIKARSFLPSLSREKGQRSLVSVQKPLHIAASLGVGNFVSVKSDDDKRGDLVKCEAYEADRSEVEGASTPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATGIAEAPKTDPEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGESFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPQMWAAGWQTAMSQIGPQFIWWLAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKL* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2592 395 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 103 394 IPR004696 GO:0016021|GO:0022857|GO:0055085
Gso8g2592 395 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 30 394 - -
Gso8g2592 395 Pfam Triose-phosphate Transporter family 103 391 IPR004853 -
Gso8g2592 395 PANTHER SOLUTE CARRIER FAMILY 35 30 394 - -
Gso8g2592 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2592 Gso-Chr8 43507183 43511803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2592 1 395 Antiporters AT5G54800 75.062 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2592 K15283 - gmx:732659 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2592 8 43507183 43511803 Gso8g2592 8 43507183 43511803 ECH
Gso18g0836 18 10814598 10819390 Gso8g2592 8 43507183 43511803 GST
Gso8g2592 8 43507183 43511803 Gso14g0220 14 1911896 1916376 PCT
Gso8g2592 8 43507183 43511803 Gso2g2451 2 49041440 49045977 PCT
Gso14g0220 14 1911896 1916376 Gso8g2592 8 43507183 43511803 PCT
Gso2g2451 2 49041440 49045977 Gso8g2592 8 43507183 43511803 PCT