Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2589 ATGGTAGTAACCATTGTAGCTTCTCATTGTGTTGTTCCAAACCAAGAAACACCCAAGGTTCGTTTATGGTTATCAGATAGTGACCAAGTAGTGCGTTTAGGTCATACACCCACTATATATGTTTACAAAGCAAAACACAACACCAAAACCATAGAGAGAATGAAAACCTCACTTGGCAAGATTTTGGTGTACTACTATCCAGTTGCTGGAAGATTGAACTTATCAGATAGTGGTCGAATGGAATTGGATTGCAACGCAAAGGGAGTGACACTTCTTGAAGCTGAAACCACAAAGTCATTGGGTGATTATGGAGATTTTTCACCTTCTGAGTCCATCAAGGAAGAGCTTGTTCCACAAATTGATTATACTCAACCCTTAGAGGAGCTTCCTTTGTTGTTTGTGCAATTGACAAGATTCAAAGATGGTGAAAGCTTTGCCATTGGAGTTGCCTGCTCCCATACGTTGGCTGATGGTCTTAGTGCAATTCAATTCATCAATTCATGGGCAAAGGTAGCTCGAGGAGAGACACTAGAGCCACATGAAGTGCCATTTCTTGATAGAACAGTTCTCAAACTCCAACACTCTCCATCAGCACCATGCTTTGATCACCCAGAACTGAAGCCACTACCACTCAAACTAGGAAGTTCTGATAGCATTGCTGAGGAAAACAAGAAGACATGTGCTGTATTACTGAAACTAACACCAGAGCAAGTGGGGAAGCTGAAAAAGAAGGCCAATGACCAACCCATGAAAGAAGGGTCAAGAGTAAGACCTTATAGCAGATTTGAAGCTATTGCTGCTCATATATGGAGATGTGCATGTAAGGCTCGTGAACTTGATGAGAAACAACCAACCCTAGTTCGGTTCAACGGTGACATTCGCAGCAGACTAATTCCACCTCTTCCTAGGACTTACTTTGGGAATGCTTTGGCAGCAACAGTTACACCCAGATGTTATGTTGGAGAAACCTTGTCAAAACCATTGAGCTATGCTGCCCAAAAAGTAAGAGAAGCAATTGAAATGCTTACGAATGAGTACATAAGGTCACAGCTAGACATTGTATTAGGTGAGGAGCAATTGGATTGCATAAAGGCTTTATTCTCGGGACAAGGAGAACGTAGGAATGCACCATTTGCAGGGAATCCGAATCTTCAAATCACAAGCTGGATGAGCATGCCAGTGTATGAAGCAGATTTTGGTTGGGGAAAGCCTATGTATTTTGGTTTGGCATATGTGTCTGCACAAGATAGGGCAGTGATTCTTCTAAGTCCTCATGGGGATGGATCCGTTATTGTGTCCATGCACTTCCAAATAGCACATATGCAACTCTTCAAGAAATACTTCTACGAGAATATATGA 1359 0.4209 MVVTIVASHCVVPNQETPKVRLWLSDSDQVVRLGHTPTIYVYKAKHNTKTIERMKTSLGKILVYYYPVAGRLNLSDSGRMELDCNAKGVTLLEAETTKSLGDYGDFSPSESIKEELVPQIDYTQPLEELPLLFVQLTRFKDGESFAIGVACSHTLADGLSAIQFINSWAKVARGETLEPHEVPFLDRTVLKLQHSPSAPCFDHPELKPLPLKLGSSDSIAEENKKTCAVLLKLTPEQVGKLKKKANDQPMKEGSRVRPYSRFEAIAAHIWRCACKARELDEKQPTLVRFNGDIRSRLIPPLPRTYFGNALAATVTPRCYVGETLSKPLSYAAQKVREAIEMLTNEYIRSQLDIVLGEEQLDCIKALFSGQGERRNAPFAGNPNLQITSWMSMPVYEADFGWGKPMYFGLAYVSAQDRAVILLSPHGDGSVIVSMHFQIAHMQLFKKYFYENI* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2589 452 Gene3D - 1 208 IPR023213 -
Gso8g2589 452 Gene3D - 215 451 IPR023213 -
Gso8g2589 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 452 - -
Gso8g2589 452 Pfam Transferase family 2 450 - -
Gso8g2589 452 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2589 Gso-Chr8 43436835 43438919 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2589 1 450 Monolignol Biosynthesis Gene Families AT5G48930 38.717 8.86e-101 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2589 K13065 - gmx:100779814 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0845 18 11174657 11176362 Gso8g2589 8 43436835 43438919 GST