Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2588 ATGGTAACCATTGTGGGTTCTTACAATGTCACTCCAAATCAACCAACTCCAAAGGATCCTTTATGGCTATCCAATAGTGACCTAATCGGGTTCCAAGGTTATGTACCCACTCTTTACGTTTACAAAGCAAAACCCAATTATAGCAACAACATAATTGAGAGGTTGAGAAACTCTCTTAGCAAGCTTTTGGTGTACTACTATCCTGTTGCTGGCAGATTGAGCTTGACAAAAAGTGGTCGAATGGAAGTGGATTGTAACGCTAAGGGAGTGACATTGATTGAAGCAGAAACCACAAACACATTTGCTGATTATGGAGACTTTACTACACCTTCAGAGTCCACAGATGAACTTGTTCCAAAAATTGATTCTACTCAACCTATAGAGGAGACTCCAATACTGGTAGTGCAATTAACAAGGTTCCGTGGTGGTGATGAAGGCCTTGCCGTTGGATTTGGTATGTTTCATTCTTTGACTGATGCAACCGGCATCATTCACTTCATGAACAGATGGGCAAAGCTGGCTAGAGGGGAAGAACTAAACCCTAATGAAATTCCGTTTCTCGATCGAACAATACTCCAATTATTTTCATCATCATCGCAACACGTGGATCAACCGGAGTGGAAGCCTATAACACAAGCACAAGGAGTAGAGCAAAAGCAAAGAAGTTGTTCTTTGTTAAAACTCACATCAAGCCAAGTGGAGAGGCTAAAGAAGAAGACTAATGATGAAAGTCCAAAAGAATTAGGGGTAAGACCTTATAGCAGATTTGAAGCTATTGCTGCTCATATATGGAGATGTGCATCTAAGGCTCGTGCTGAATATTCAAATTCAAATCACCCAACTATAGTTCGGTTTAGTGTTAATATTCGTAATAGGTTATTGACTCCACCTATCCCTGAGAGTTATTTTGGGAATGCTTTGGCAAGAACAACGACACCTAAATGCTATGAGGGAGATATCATATCGAACCCTTTAAGTTTTGCTGCTCAAAAGTTAAGGGAAGCAGTAAATCCGATTACGGGTGAGTATATAAAGTCACAATTAAGTGTTGGTTTAGGGCAAGAGCAATTGGATCACATAAGGGCTTTTTTCATGAGACAAGAACACGGTATGAAAACACCCTATATTGCTGGGGAACATAACAACGTTATTCTCCTTACAAGCTTGATGACCATGCCAGTGTATGAAGCAGATTTTGGTTGGGGAAAGCCTATGCAATTTGGTTTACCACGTGGGTCTCTAGATGATAGGGTAGGAATTCTTCCAAGCCCAGATGGAGATGGTGTTGTTGTCAACGTGTTTTTCCAGGAAGCAATTCTGCAGCGTTTCAAAAAGTTGTTCTACGAGGATGTGTATATATCCTCATTGTAG 1371 0.4063 MVTIVGSYNVTPNQPTPKDPLWLSNSDLIGFQGYVPTLYVYKAKPNYSNNIIERLRNSLSKLLVYYYPVAGRLSLTKSGRMEVDCNAKGVTLIEAETTNTFADYGDFTTPSESTDELVPKIDSTQPIEETPILVVQLTRFRGGDEGLAVGFGMFHSLTDATGIIHFMNRWAKLARGEELNPNEIPFLDRTILQLFSSSSQHVDQPEWKPITQAQGVEQKQRSCSLLKLTSSQVERLKKKTNDESPKELGVRPYSRFEAIAAHIWRCASKARAEYSNSNHPTIVRFSVNIRNRLLTPPIPESYFGNALARTTTPKCYEGDIISNPLSFAAQKLREAVNPITGEYIKSQLSVGLGQEQLDHIRAFFMRQEHGMKTPYIAGEHNNVILLTSLMTMPVYEADFGWGKPMQFGLPRGSLDDRVGILPSPDGDGVVVNVFFQEAILQRFKKLFYEDVYISSL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2588 456 Gene3D - 205 449 IPR023213 -
Gso8g2588 456 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 451 - -
Gso8g2588 456 Gene3D - 1 204 IPR023213 -
Gso8g2588 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 451 - -
Gso8g2588 456 Pfam Transferase family 1 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2588 Gso-Chr8 43417661 43419312 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2588 2 449 Monolignol Biosynthesis Gene Families AT5G48930 31.947 5.88e-69 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2588 K13065 - gmx:100779280 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0846 18 11255581 11257231 Gso8g2588 8 43417661 43419312 GST