Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2586 ATGGTAACCATCAAAGCTTCTCACACTGTGGTTCCAAATCAACCAACACCTAAAGGTCGATTATGGCTATCAAATAGTGACCAAACCGCACGCCCAGCACACACACCAAACCTTTACATCTACAAAGCAAAACACAACATCATCGAATATGACATTGAGAAAATGATAGACTCTCTCAGCATCATTTTAGTGTACTACTATCCGGTAGCTGGCAGATTGAGTGTTACAGAAAGTGGTCGAATGGAAGTGGATTGCAACGCAAAGGGAGTGACATTGATCGAAGCCGAAACCGTGAAAACAATTGATGATTTTGGAGACTTCACACCTTCTGAGTCAGTCAAGGAAGAGCTTGTTCCAGTAATTGATTATCACTCTCAACCTATAGAAGAGATTCCTTTGGTCTTAGTCCAAGTGACAAGATTTAAAGGTGATAAAGAACAACAACAAGGCCTTGCTATTGCAGTCGCTGTTTCTCATCCTGTGGCTGATGGGTCTGCTTGGATTCACTTTATCAACACATGGGCTAAGGTTAATAGAGGTGACATGTTAGGTCTTAATGACATGCCATTTATAGATAGAACCATACTCAAATCTTCGTCGTCGTTGTCGTCGTTGTCACCACCACCCTCACCACGCTTCGATCACCCTGAGTTGCAGCCTCTACCATTCATACTAGGCAGATCTGATAGTACTGAAGAGCAAAAGAAGAAGACAACAGCTGCTATGTTGAAACTCACATCAGAACAAGTGGAGATGTTGAGGAAAAAGGTTAATGAAAATGAAAACTTATCAACAAAACAAGGGTCAAGATCAAGATCAAGATCAAGACCTTGTAGCAGATTTGAAGCTGTGGCTGCACATATATGGAGATGTGCATGTAAGGCTCGTAAACTAGATCGAAATCAACCAACCCTTGTTAGGTTCAACGCCGATTTTCGAAGCAGACTAACTCGGCCTCTCCCAAGGAATTATTTCGGGAATGCCTTGGCGGCCACAGTGACACCGGAATCTTATGCTGGAGAAATCACATCAAGACCATTGAGTTATGCAGCAAGAAAATTGAGAGAAGCTGTGGAGATGCTCAAGGAAGAATACATAACTTCGCAGTTAGAAGTTGTGTTGGGCGAGGAGCAATTGGAGTCCATAAAGGCTTTGTTCTCGAGACAAGGAGAACGTAGGAATTCTCCTTTTGCAGGAAATCCTAACCTTCAAATCACAAGCTGGATCAGCATTCCACTATATGAAGCAGATTTTGGGTGGGGAAAGCCTGAGCATTTTGTTCTGGGATATGTGTGTCCGTTTGATAGAGGGATTATTATTCGAGGTCCAGAAAATGATGGTTCTGTGATTGTGATCATGTATTTCCAGATAGCACATATGCAACTCTTTAAGAAATTCTTCTACGAGGATGTATTTACATCAAGGTTGTAA 1431 0.4207 MVTIKASHTVVPNQPTPKGRLWLSNSDQTARPAHTPNLYIYKAKHNIIEYDIEKMIDSLSIILVYYYPVAGRLSVTESGRMEVDCNAKGVTLIEAETVKTIDDFGDFTPSESVKEELVPVIDYHSQPIEEIPLVLVQVTRFKGDKEQQQGLAIAVAVSHPVADGSAWIHFINTWAKVNRGDMLGLNDMPFIDRTILKSSSSLSSLSPPPSPRFDHPELQPLPFILGRSDSTEEQKKKTTAAMLKLTSEQVEMLRKKVNENENLSTKQGSRSRSRSRPCSRFEAVAAHIWRCACKARKLDRNQPTLVRFNADFRSRLTRPLPRNYFGNALAATVTPESYAGEITSRPLSYAARKLREAVEMLKEEYITSQLEVVLGEEQLESIKALFSRQGERRNSPFAGNPNLQITSWISIPLYEADFGWGKPEHFVLGYVCPFDRGIIIRGPENDGSVIVIMYFQIAHMQLFKKFFYEDVFTSRL* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2586 476 MobiDBLite consensus disorder prediction 256 276 - -
Gso8g2586 476 Coils Coil 351 371 - -
Gso8g2586 476 Gene3D - 227 470 IPR023213 -
Gso8g2586 476 Coils Coil 243 263 - -
Gso8g2586 476 Gene3D - 1 220 IPR023213 -
Gso8g2586 476 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 471 - -
Gso8g2586 476 MobiDBLite consensus disorder prediction 1 28 - -
Gso8g2586 476 Pfam Transferase family 1 469 - -
Gso8g2586 476 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2586 Gso-Chr8 43387921 43389585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2586 2 469 Monolignol Biosynthesis Gene Families AT5G48930 36.538 1.31e-94 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2586 K13065 - gmx:100777680 916.376