Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2585 ATGGCTACCATAAAAGCTTCTCACACTGTGGTTCCAAATCAACCAACACCAAAAGGTCGATTGTGGCTATCCAACAGTGACAATTCCACACGTAAAGCACATTCACCAGTTATTTACATCTACAAAGCAAAACACAACATTGAATACAACATTGAGAGGATGAAAGAGTCTCTTAGCAAAACTCTAGTGTACTTCTATCCAGTTGCTGGCAGATTGAGCTTATCAGAAAGTGGTAGAATGGAAGTGGATTGCAACGCAAAGGGAGTGACATTGATCGAAGCCGAAACCGCGAAAACATTGGCTGATTTTGGAGACTTTTCACCCTCTGATTCCATCAAGGAAGAACTTGTTCCAGCAATTGATTATCACTCTCAACCTATACAAGAGATTCCTTTGCTATTTGTTCAACTAACAAGATTCAAAGGTGACCAACAACAACAACATGGCCTTGCCATTGGAATGGCTTACTCACATCCTGTGGCTGATGGGCTTGCTTGGACTCGCTTTGTCAACACATGGGCAACGGTCAATAGAGGAGACTCATTAGATGTTAATGAAATGCCATTTCTAGATCGAACTATACTCAAATTTCCAACATGGTCATCGTCATTGTCGTTACTGTCACCACCACCACTATCGCACTCTGATCACCCAGAGCTGAAGCCTCTTCCACTCATACTAGGCAGATCTGACAGCACTGAAGAGCAAAACAAGAAGACAACAGCATCTGTGTTGAAACTCACATCAAAGCAAGTGGAGATGCTGAAGAAGAAGGCCAATGATCAAGGGTCAACACCTTGTACCAGATTTGAAGCTGTGGCCGCACATATATGGAGATGTGCATGCAAGGCTCGCGGACAACATCACAAGCAACCAACTATAGTTCGGTTCAATGGTGATATTCGCAACAGATTAATCCCTCCTCTCCCCAGGAACTACTTTGGGAATGCATTGGTAGCAACAGTGACACCAGAATGTTATGTTGGAGAAATCACATCAAGACCATTGAGTTATGCAGCAAGAAAATTGAGAGAAGCAATAGCGTTGCTCAGAGATGAGTACATCAGGTCACAGTTAGAAGCTGTGTTTGGTGAGGAGCAATTGAAGTGCATAAGGGCTTTCTTCTTGGGACAAGGTGAAGGTAGAAGTGAACCGTTTGGAGGGAATCCAAATCTTCAAATCACAAGCTGGATCAACTTCCCGGTGGATAGTACAGATTTTGGGTGGGGAAAGCCTGTGTATTTTGGTCTAGGATATGTGTGTGCACTTGATAGGGGGATTATTGTTCGAGATCCACAAGATGATGGTTCTTTGATTGTGATCATGCATTTCCAGATAGCACATATGCAACTCTTTAAGAAACTCTTCTACGAGGATATATTCACTTCAAGGCTGTAA 1398 0.4292 MATIKASHTVVPNQPTPKGRLWLSNSDNSTRKAHSPVIYIYKAKHNIEYNIERMKESLSKTLVYFYPVAGRLSLSESGRMEVDCNAKGVTLIEAETAKTLADFGDFSPSDSIKEELVPAIDYHSQPIQEIPLLFVQLTRFKGDQQQQHGLAIGMAYSHPVADGLAWTRFVNTWATVNRGDSLDVNEMPFLDRTILKFPTWSSSLSLLSPPPLSHSDHPELKPLPLILGRSDSTEEQNKKTTASVLKLTSKQVEMLKKKANDQGSTPCTRFEAVAAHIWRCACKARGQHHKQPTIVRFNGDIRNRLIPPLPRNYFGNALVATVTPECYVGEITSRPLSYAARKLREAIALLRDEYIRSQLEAVFGEEQLKCIRAFFLGQGEGRSEPFGGNPNLQITSWINFPVDSTDFGWGKPVYFGLGYVCALDRGIIVRDPQDDGSLIVIMHFQIAHMQLFKKLFYEDIFTSRL* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2585 465 Gene3D - 229 459 IPR023213 -
Gso8g2585 465 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 460 - -
Gso8g2585 465 MobiDBLite consensus disorder prediction 1 30 - -
Gso8g2585 465 Gene3D - 2 203 IPR023213 -
Gso8g2585 465 Pfam Transferase family 3 458 - -
Gso8g2585 465 Coils Coil 340 360 - -
Gso8g2585 465 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2585 Gso-Chr8 43384957 43386930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2585 4 458 Monolignol Biosynthesis Gene Families AT5G48930 36.324 1.90e-91 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2585 K13065 - gmx:100777157 930.628