Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2563 ATGTCAGGAAACAGTTCTTTGCATGTGGGATTATCGAGGAAGACTTCGTTTTTGGGATTGCGATTATGGGTTTTGATTGGGATAGGTGTTGGTGTTTTTATAGTTGTGATTCTTTGTGTATTATCTGCATGGGTGATGTTTCGGAGAAAGTCTCGGGGATCTCTGGACAAGTACTCTTTGTCGCAAATACCACATATCTCAAAGGACATCAGAGTCGACAAGGTTGGGGTGCAGACTTCTCACGATCAACCGGACAGTGTAGCTATTCCTGTTTATGACAAACCGAGTGAGAACAACTCGGACAAGTTCTTGGCTCATTTGAGCAAGAACAAATCCGGCGATGCTGATAATATCAGTCAGTGCAGCTCGGTTTATCATCATGAGAGAGGATTTAGTTCAATGTCGGGGGATGAAGGAAGCTCCGGGACTGTTAAGAAGCAGTCTGCATCGTCATTTGGAGGAATGGTAACAGCATCTCCTCTAGTTGGCTTGCCAGAATTTTCTCATCTCGGGTGGGGCCACTGGTTCACACTTAGAGATCTGGAAATTGCAACTAATCGCTTCTCTCCAGAGAATGTGATTGGTGAGGGTGGATATGGGGTTGTTTACAGGGGAAGCTTGATCAATGGATCCGAGGTGGCAGTGAAGAAAATTCTTAACAACTTGGGACAAGCAGAGAAAGAATTCAGGGTGGAAGTAGAGGCTATTGGCCATGTTAGACATAAAAATCTTGTACGATTACTTGGTTATTGCGTAGAAGGGGTTCACAGGTTGCTGGTATATGAATATGTGAACAATGGTAACTTAGAACAATGGCTACATGGGGCTATGAGCCAACAAGGGACACTTACCTGGGAAGCCCGGATGAAAGTTATAACTGGAACAGCCAAAGCGCTAGCTTACTTACATGAAGCAATAGAACCGAAAGTCGTTCACCGGGATATAAAGTCAAGCAACATATTGATTGATACTGATTTCAATGCAAAGGTTTCTGACTTTGGTTTGGCCAAACTTTTGGATTCAGGAGAAAGTCACATTACTACTAGAGTAATGGGAACATTTGGTTATGTGGCACCGGAATATGCTAATACAGGTTTGTTAAATGAGAGGAGTGACATTTACAGCTTTGGTGTTCTCCTGCTTGAAGCAGTTACTGGAAGGGATCCTGTGGACTACTCACGTCCTTCTAACGAGGTGAATCTTGTTGAATGGCTCAAGATGATGGTGGGGACAAGGAGAACTGAGGAAGTTGTCGACTCAAGGCTTGAAGTGAAACCATCAATACGTGCTTTAAAGTGTGCTCTTCTAGTTGCTCTTAGATGTGTTGATCCCGAAGCAGAAAAGAGGCCCAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCCGACGAATATCCATTCCGAGAGGATCGAAGAAATAGAAAGAGCCGCACCGCGAGCATGGAAATTGAATCTCTGAAGGATATTTCTGGTCCATCTGATGCTGAAAAGTTGAAGGGTGGGCATGCACCAGAAACAACTCAAGGGTAG 1527 0.4414 MSGNSSLHVGLSRKTSFLGLRLWVLIGIGVGVFIVVILCVLSAWVMFRRKSRGSLDKYSLSQIPHISKDIRVDKVGVQTSHDQPDSVAIPVYDKPSENNSDKFLAHLSKNKSGDADNISQCSSVYHHERGFSSMSGDEGSSGTVKKQSASSFGGMVTASPLVGLPEFSHLGWGHWFTLRDLEIATNRFSPENVIGEGGYGVVYRGSLINGSEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGAMSQQGTLTWEARMKVITGTAKALAYLHEAIEPKVVHRDIKSSNILIDTDFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNERSDIYSFGVLLLEAVTGRDPVDYSRPSNEVNLVEWLKMMVGTRRTEEVVDSRLEVKPSIRALKCALLVALRCVDPEAEKRPKMSQVVRMLEADEYPFREDRRNRKSRTASMEIESLKDISGPSDAEKLKGGHAPETTQG* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2563 508 SUPERFAMILY Protein kinase-like (PK-like) 172 461 IPR011009 -
Gso8g2563 508 Gene3D Phosphorylase Kinase; domain 1 169 263 - -
Gso8g2563 508 MobiDBLite consensus disorder prediction 466 481 - -
Gso8g2563 508 SMART serkin_6 188 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2563 508 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Gso8g2563 508 ProSiteProfiles Protein kinase domain profile. 188 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2563 508 Gene3D Transferase(Phosphotransferase) domain 1 264 477 - -
Gso8g2563 508 PANTHER RECEPTOR-LIKE KINASE PLANT 2 498 - -
Gso8g2563 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Gso8g2563 508 PANTHER OS01G0323000 PROTEIN 2 498 - -
Gso8g2563 508 CDD STKc_IRAK 194 460 - -
Gso8g2563 508 MobiDBLite consensus disorder prediction 466 508 - -
Gso8g2563 508 Pfam Protein kinase domain 191 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2563 Gso-Chr8 43079095 43084324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2563 19 462 Trihelix Transcription Factor Family AT1G70460 39.602 2.27e-91 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gso8g2563 Pkinase 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2563 - - gmx:100784634 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2563 8 43079095 43084324 Gso8g2563 8 43079095 43084324 ECH
Gso18g0880 18 12149375 12154644 Gso8g2563 8 43079095 43084324 GST
Gso8g2563 8 43079095 43084324 Gso14g0249 14 2187583 2193044 PCT
Gso14g0249 14 2187583 2193044 Gso8g2563 8 43079095 43084324 PCT
Gso14g1605 14 48049549 48053328 Gso8g2563 8 43079095 43084324 PCT
Gso2g1907 2 43332319 43336485 Gso8g2563 8 43079095 43084324 PCT