LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso8g2552	ATGTCTTCAGCTATCTTTCTTCCTTTCATACTTTCACTTTCACTTTCACTTTCACTTCTGAATGGCTTAGATGTCATACAATTAAACACAAACATCACTGCCGGTTCAAATTCTACCTGGAAGTCACCCTCGGGCGATTTTGAATTCGGATTCTATGATCTTCGCACTGGTCTCTTTCTTGTGGGAATATGGTTTGGAAAAATCCCAGACAGAACTTTGGCATGGTACTTCCAGAGTCCCCCTGTGGAAGCAAATTCCCAAATCCAATTCACTTCTGCAGGAAACCTTGTGGTTGCATACCCGAACCAGACTATTGCTCAAACCATATACAGTGGTGGTGCTGCAACTTCTTCCTACATGCAAGATGACGGAAATTTTGTCATGAAGGACTCCAACTCGGAATCTGTCTGGCAGAGTTTCAATTCTCCTTCCAACACAATGTTACCAGGACAAACGTTGCAGAGTACCAAAGTTCTCTATTCCAAGGAGAGAGGAGATTCAAACTACTCATTGGGAAAATTCATGTTACAAATGCAAGACGATGGAAACTTGGTGCTAAAAGCGTACCAATGGTCTGGCCCTGCATACTGGTACAATTCAACCAACACCCCCAATGTGAATTTGGAGTTTAATGCTACCAGTGCTCTCATGCACTTTGTTAACGGCTCTAGGAGCATCTACACCTTAACAAAAAGCACTTCAACCCCCGTGGAAGATTACTATCACCGCGCTACAATAGATGAGAATGGAAATTTTCAGCAATATGCATATCCCAGACGAAACGAGAATGACACCACTGGGTGGAGGAGGGTTTGGAGAGCTGTGGAAGATCCCTGCAGAGTGAATCTTGTTTGTGGTGTTTATGGTTTGTGCACTTCTCCTGACAATGAATCAGTCAAGTGTGAGTGTATTCCGGGTTATATCCCATTGGATCATCAAGATGTGTCCAAAGGGTGTCACCCACCAGATACAATCAATTACTGTGCAGAGAAGAAGTTCAAGGTAGAGGTGTTTGGGGACACTGATTTCCAATTCGATAATAATTTTGTTCGCGTATATGATGTTGATTTGGAAGGTTGTAAGAAGTCTTTAATGGATGATTGTAATGTCATTGCTGCAACTTATAACACCTCCACCCGCACATGTGCCAAGAAGAGGTTGCCTTTGCTGAATGCTAGAAATAGCTCTTCTTCGAAGGGACAGAAAGCACTGCTTAAAGTTCCTAACAGTGTTGATGATGGGAGATCTAATAAAGCTACCAACAAAAAGAGCTTTAATGTAAGAATATTTTTGAAGGTTATGCTTGCAGTTACTGCCACTCTTGCATGTTTCTTTGGTGCCCTTGTTGTCTACTATCACCCTTTCACTCAGAGACTAGCAAGAAGAAAGCGGTATTTGAATGCAAGCGCTATTGGAATCAACTTCAGAGAATTCACCTTCCAGGAGCTGCATGAAGCAACAGATGGATTCACTAGGATTCTTGGAAGGGGTTCTTCGGGTAAAGTCTATCACGGAACTTTAATAATAGACGATGCAGTGATTGGTATTGCAGTAAAGAAACTGGAAAAGAAAATTGAGAAAAGTGAGAGTGAATTCATGACTGAGCTCAAAATTATTGGCCGTACCCATCACAGAAATTTGGTGAGGCTTTTGGGCTTTTGCATTGAGAGTAGCCATCGAGTTCTTGTGTATGAGTTGATGACGAACGGAGCATTGTCAAGCTTTTTGTTTGGAGAGGGAGAAAGGCCTCAATGGGGTCAGAGGATCGAAATGGCTCTTGGAGTCGCACGAGGCTTACTATACCTGCACGAAGAGTGCCACACCCAAATCATACATTGTGATATCAAGCCCCAAAATGTGTTACTTGATTCCAATCACACAGCAAAGATAGCAGATTTTGGGCTTTCCAAGCTTTTGCTCAAAGATCAAACTAGAACAAGCACCAATTTAAGAGGGACAATAGGTTATATGGCACCTGAATGGCTAAAGAGCGCACCAATAACTGCCAAAGTTGATATATACAGTTTTGGGGTTATGTTATTGGAGATTATTTGTTGCAGGAGGCACTTCGAGTCTCCTCACGATGCAAACGACAGCGAAGATGATGATTTGGTTCTTTCAAATTTGGTTTTAAGGAGTGTGGTGTCTAGGAAGCTAGAGGTAGTGGTGAGACACGACTCAGAAGTGCTGAATGATTTCAAGAGGTTTGAAGAAATGGCATTGGTTGGACTATGGTGTGTTCATCCGAATCCGGCTCTTAGACCTTCAATGAAGCATGTGATGCAGATGCTAAATGGAACTGTGGAAGTTGGGATTCCTCCTTTGGTTTATGATCAGATGATGGAAGATCAGGGCTTGTAG	2361	0.4248	MSSAIFLPFILSLSLSLSLLNGLDVIQLNTNITAGSNSTWKSPSGDFEFGFYDLRTGLFLVGIWFGKIPDRTLAWYFQSPPVEANSQIQFTSAGNLVVAYPNQTIAQTIYSGGAATSSYMQDDGNFVMKDSNSESVWQSFNSPSNTMLPGQTLQSTKVLYSKERGDSNYSLGKFMLQMQDDGNLVLKAYQWSGPAYWYNSTNTPNVNLEFNATSALMHFVNGSRSIYTLTKSTSTPVEDYYHRATIDENGNFQQYAYPRRNENDTTGWRRVWRAVEDPCRVNLVCGVYGLCTSPDNESVKCECIPGYIPLDHQDVSKGCHPPDTINYCAEKKFKVEVFGDTDFQFDNNFVRVYDVDLEGCKKSLMDDCNVIAATYNTSTRTCAKKRLPLLNARNSSSSKGQKALLKVPNSVDDGRSNKATNKKSFNVRIFLKVMLAVTATLACFFGALVVYYHPFTQRLARRKRYLNASAIGINFREFTFQELHEATDGFTRILGRGSSGKVYHGTLIIDDAVIGIAVKKLEKKIEKSESEFMTELKIIGRTHHRNLVRLLGFCIESSHRVLVYELMTNGALSSFLFGEGERPQWGQRIEMALGVARGLLYLHEECHTQIIHCDIKPQNVLLDSNHTAKIADFGLSKLLLKDQTRTSTNLRGTIGYMAPEWLKSAPITAKVDIYSFGVMLLEIICCRRHFESPHDANDSEDDDLVLSNLVLRSVVSRKLEVVVRHDSEVLNDFKRFEEMALVGLWCVHPNPALRPSMKHVMQMLNGTVEVGIPPLVYDQMMEDQGL*	787

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso8g2552	786	ProSitePatterns	Protein kinases ATP-binding region signature.	494	520	IPR017441	GO:0005524
	Gso8g2552	786	Gene3D	-	23	142	IPR036426	-
	Gso8g2552	786	SMART	blect_4	31	143	IPR001480	-
	Gso8g2552	786	PIRSF	SRK	1	784	IPR024171	GO:0004674
	Gso8g2552	786	Pfam	S-locus glycoprotein domain	236	309	IPR000858	GO:0048544
	Gso8g2552	786	Gene3D	Phosphorylase Kinase; domain 1	464	566	-	-
	Gso8g2552	786	ProSiteProfiles	Protein kinase domain profile.	488	768	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso8g2552	786	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	3	776	-	-
	Gso8g2552	786	Gene3D	-	143	281	-	-
	Gso8g2552	786	Pfam	D-mannose binding lectin	81	160	IPR001480	-
	Gso8g2552	786	SUPERFAMILY	alpha-D-mannose-specific plant lectins	59	201	IPR036426	-
	Gso8g2552	786	Gene3D	Transferase(Phosphotransferase) domain 1	567	773	-	-
	Gso8g2552	786	SUPERFAMILY	Protein kinase-like (PK-like)	475	770	IPR011009	-
	Gso8g2552	786	PANTHER	SERINE/THREONINE-PROTEIN KINASE	3	776	-	-
	Gso8g2552	786	Pfam	Protein kinase domain	492	762	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso8g2552	786	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	610	622	IPR008271	GO:0004672\|GO:0006468
	Gso8g2552	786	SMART	serkin_6	488	764	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso8g2552	786	ProSiteProfiles	Bulb-type lectin domain profile.	25	141	IPR001480	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso8g2552	Gso-Chr8	42853111	42856169	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso8g2552	433	774	Receptor kinase-like Gene Family	AT3G53380	38.329	1.02e-62	222

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Gso8g2552		Pkinase	4e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso8g2552	-		-	gmx:102662509	1533.47