Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2548 ATGGTGGTGAAGGTGTATGGTCCAACCTATGGATCCCCCAAGAGGGTCCTGGTGTGTCTGATTGAGAAGGAAATTGAGTTTGAAACAGTGCATGTTGATCTCTTCAAGGGAGAGAATAAGGAACCTGAGTTCCTTAAGCTGCAGCCATTTGGATCCCTTCCTGTTATTCAAGACGGTGATTATACTCTCTATGAATCTCGTGCAATAATCAGATACTTAGCTGAGAAGTATAAAGACCAAGGGACTGACTTATTGGGAAAGACAATAGAAGAAAAGGGTCTAGTGGAACAATGGCTTGAAGTGGAAGCTCATAACTTTCACCCACCACTCTACAACTTGGTTATTAATGTTCTGTTTGCGCCATTAACAGGGGCTCCTTCGGACCAAAAAGTGATAGAAGAAAGTGATAAAAAGATTGAGAAGGTGCTGGATGTTTATGAGGAGAGGCTGTCAAAGAGCAAGTACTTGGCTGGTGACTTCTTCAGCCTTGCTGATCTTAGCCACCTCCCATTTGGTCACTATTTGGTGAACCAAACCGGGAGAGGAAATTTGGTCAGAGACAGGAAGCATGTGAGTGCTTGGTGGGATGATATTAGTAACAGACCAGCTTGGCAGAAGGTTCTTCAGCTATATAAATACCCTGTCTAG 648 0.4367 MVVKVYGPTYGSPKRVLVCLIEKEIEFETVHVDLFKGENKEPEFLKLQPFGSLPVIQDGDYTLYESRAIIRYLAEKYKDQGTDLLGKTIEEKGLVEQWLEVEAHNFHPPLYNLVINVLFAPLTGAPSDQKVIEESDKKIEKVLDVYEERLSKSKYLAGDFFSLADLSHLPFGHYLVNQTGRGNLVRDRKHVSAWWDDISNRPAWQKVLQLYKYPV* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2548 215 Pfam Glutathione S-transferase, C-terminal domain 112 202 IPR004046 -
Gso8g2548 215 CDD GST_N_Phi 2 76 - -
Gso8g2548 215 SFLD Glutathione Transferase (cytosolic) 13 201 IPR040079 -
Gso8g2548 215 Gene3D - 86 208 - -
Gso8g2548 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 215 - -
Gso8g2548 215 SUPERFAMILY GST C-terminal domain-like 72 212 IPR036282 -
Gso8g2548 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 215 IPR010987 -
Gso8g2548 215 CDD GST_C_Phi 90 208 IPR034347 -
Gso8g2548 215 Gene3D Glutaredoxin 1 85 - -
Gso8g2548 215 SFLD Main (cytGST) 13 201 - -
Gso8g2548 215 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Gso8g2548 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Gso8g2548 215 SUPERFAMILY Thioredoxin-like 3 81 IPR036249 -
Gso8g2548 215 PANTHER GLUTATHIONE S-TRANSFERASE 2 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2548 Gso-Chr8 42792647 42794352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2548 1 215 Glutathione S-transferase Gene Family AT2G30870 61.395 1.01e-102 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2548 K00799 - gmx:547589 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2548 8 42792647 42794352 Gso8g2548 8 42792647 42794352 ECH
Gso8g2548 8 42792647 42794352 Gso14g0264 14 2318853 2320427 PCT
Gso14g0264 14 2318853 2320427 Gso8g2548 8 42792647 42794352 PCT