Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2546 ATGGGATGCTTCTTCGCTTGCTTCAGAGCCCGCGACTCCTCCTCCGCCACCGCCCCCACAGCTACGGTGCCTTCTTCTCCTTCCGGCAAACACAAACCTACCGATGTTGTGGTCTCTCGAAATCAGTTATCCACTTTGTTTCTATCCGAAGAGAGAGAAAACTCTGTTGTGCGTGATGATCGGAAGAGTTTTGAAGTGGGATCTCAGAAAGGTGACTATGAGGCCAAGTTTCTCAAAGCTGGTGATACCTTGGCAAGGACCCCCCTTGAGAAAGCCCACCCTGTTGGTCAACCTTTCAATCCCTCAACTCCTGTAAAATGTTGTGAGGAAGGGGGGAAGAGAACTGATTCCTTAGAGCAAACACCAAGCAGCTGTATCTCCAATGTGCTAAGTACTCAATGTGACACTCTTGATTCTACGGAAGGAATTAGGACAGGGAGTCTTCACAGTTTGGATAAGAATGACAAGAATACAGCTTCTGTTTCACCTTGGCCATCAACCACATACACGAGGAGGAACAAGTCTATAGGTTTTGAATGTGACAGTGATTTATCGTCCTGTGACTCATCCGATTATGGTGGGCGACATATGAAAAAAACAGATTCACTAAATAATGAGAGTACATATAAACCATCGCCTAATCCTACCCCGATGAAGCTATCTGATGAGATGCAAACTCCTGGAACTGCTTACCCTTCAGCAAAAGACTTGCCAAATGGTAAGCCTCGAGTTAAGTCCCAGTTTGTGTATCCAATTTACAACCCTGGTCATCATTTCTCTCAGAAGAAATTTGAAGAGAGTGAATCAGTTGAGCCGTCTCAAGTTACAACTTCAACTTCTGAAAAAGAGTTAAAGAAAATGTCTTGTGAAAATGAATGTAAGGTAGAGGAAAGCTTGTCTTCCTGGTTGAAGCCTGCAGCTGTCATTCTGGAGGAGAGAAACAAGAGAATGCAGACCAGTTATAATCAGGTCCGCAAAACACCTGCTGATAGGCCTATCATTGGGATGGTTGCAGCTCACTGGAACAAGGATGGGGATTCTCAAGCTCCTCCTCCGAAGTGGTGGGATGGTAACGGCATACCAAATTCAACCAATAAGTATAAAGAAGATCAGAAAGTAAATTGGCATGCAACATCATTTGAAGAGAGGTTAGAGAAGGCATTATCTGAGGAGACTGTCATCTCTCAAAGGAAGGATACATGTGGCAAATCAATTCCTTTTGATGAGAACGAAGAAAGTGATACTGCTCTATCTCAGCTGCAATCTTCAACTCATCCACAGTCCGTGGTGTCATTTTGA 1299 0.4426 MGCFFACFRARDSSSATAPTATVPSSPSGKHKPTDVVVSRNQLSTLFLSEERENSVVRDDRKSFEVGSQKGDYEAKFLKAGDTLARTPLEKAHPVGQPFNPSTPVKCCEEGGKRTDSLEQTPSSCISNVLSTQCDTLDSTEGIRTGSLHSLDKNDKNTASVSPWPSTTYTRRNKSIGFECDSDLSSCDSSDYGGRHMKKTDSLNNESTYKPSPNPTPMKLSDEMQTPGTAYPSAKDLPNGKPRVKSQFVYPIYNPGHHFSQKKFEESESVEPSQVTTSTSEKELKKMSCENECKVEESLSSWLKPAAVILEERNKRMQTSYNQVRKTPADRPIIGMVAAHWNKDGDSQAPPPKWWDGNGIPNSTNKYKEDQKVNWHATSFEERLEKALSEETVISQRKDTCGKSIPFDENEESDTALSQLQSSTHPQSVVSF* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2546 432 MobiDBLite consensus disorder prediction 189 221 - -
Gso8g2546 432 MobiDBLite consensus disorder prediction 11 35 - -
Gso8g2546 432 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 417 IPR039300 GO:0007142
Gso8g2546 432 MobiDBLite consensus disorder prediction 392 410 - -
Gso8g2546 432 MobiDBLite consensus disorder prediction 411 432 - -
Gso8g2546 432 MobiDBLite consensus disorder prediction 392 432 - -
Gso8g2546 432 MobiDBLite consensus disorder prediction 13 29 - -
Gso8g2546 432 MobiDBLite consensus disorder prediction 263 283 - -
Gso8g2546 432 MobiDBLite consensus disorder prediction 91 122 - -
Gso8g2546 432 MobiDBLite consensus disorder prediction 147 168 - -
Gso8g2546 432 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 417 - -
Gso8g2546 432 MobiDBLite consensus disorder prediction 204 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2546 Gso-Chr8 42776617 42781426 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2546 - - gmx:100777669 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2546 8 42776617 42781426 Gso8g2546 8 42776617 42781426 ECH
Gso8g2546 8 42776617 42781426 Gso14g0275 14 2411391 2416814 PCT
Gso8g2546 8 42776617 42781426 Gso2g2400 2 48580876 48585077 PCT
Gso2g2410 2 48683190 48688426 Gso8g2546 8 42776617 42781426 PCT