Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2545 ATGGGTGCTGAGAATGGAGGTTTCTCCGTGAATGTGACCAATGAAGAGGTGGTGGCAGCAGTGGTGCCAATGCAAGAACATTGGCTTCCACTCTCTAACCTTGACCTACTTCTACCTCCAATCGATGTTGGTGTCTTCTTTTGCTATAAGAACCCCATGCTAACGTCCACTACCTTAGGGGACACTTGCACCAACAAAATAACCTTTGAATCAATGTTGGGGTCTCTAAAAAAGGCCTTAGCACAAGCTTTGATCTCTTATTATGCATTTGCAGGTGAAGTGGTGCCCAACAACGTGGGTGAACCCGAGGTGCTTTGTAATAATCGTGGTGTTGATTTTGTTGAAGCTGTGGCTGATGTTGAGCTAAAGTGCCTCAACTTTTACAACCCAGATGACACCATTGAAGGGAAGTTTGTTCCAAAGAAGAAAAATGGAGTGCTTACTGTCCAGGCAACATCACTCAAGTGCGGTGGAATAGTACTAGCATGCATATTTGATCACCGCATAGCAGATGCATATTCAGCAAACATGTTCCTCATATCATGGGCCGAGATAGCCCAGCCCACGAAGCCCACAACTACTACCACCACCCCATGTTTCCGTCGCTCACTCCTTAGTCCTCGTCGCCCAAGTTCTATTCCTCGTTCCCTTTATGACATGTACCTCCCCATTTCTAGGATCACCCCTCCTCAAGCCACAACCGCCCCTCTCCTCAGTCGCATATACTACGTAACGGCAGAGCAACTTGAAAAGATGCAATCCCTCGTCGTCATGACAAATGAAAACAACACAAAGCGTACAAAATTTGAGTGTTTCTCCGCGTTCTTGTGGAAGATAGTTGCTCAGGCAGCTTCAAGAGGCAACAAGAAGGGCAAAAAGGTTATTGCCAAAATGGGTATTGTGGTTGATGGAAGGAAGAGACTGTGTGATGGTGACAAAGAGAAGGAAGCATTGATGGGGTGTTACTTCGGCAACGTGCTTTCCATACCCTTTGGAGGGAAAGAAGTGGAGGAGTTGATGGAGAAGCCATTAGGGCTTGTTGCCGAAGCGGTTCACGAGTTCTTGGCGGTGGCGACGAAGGAGCATTTCTTAGGGCTCATTGATTGGGTGGAAGCTCACCGGCCAGAGCCTGGGGTGGCGAAGATTTACTGTGGTGGTGGCAGTGGCGACGAAGGGCCGAGTTTTGTGGTGTCTTCCGGGCAAAGGTTAATGGAGGGAAAGATGGATTTTGGGTGGGGGGAGGTTGTGTTTGGATCTTTCCATTTTCCTTGGGGTGGTCAAGCTGGTTATGTTATGCCAATGCCAAGCCCTTTAGGGAATGGTGATTGGGTTGTGTACATGCATCTTGCCAAGGAGCAATTGGAGGTCTTAGAATCTGAGGCCAGTGATGTCTTTAGGCCTATAAGTTGGGATTACCTTAATCAGTGA 1428 0.479 MGAENGGFSVNVTNEEVVAAVVPMQEHWLPLSNLDLLLPPIDVGVFFCYKNPMLTSTTLGDTCTNKITFESMLGSLKKALAQALISYYAFAGEVVPNNVGEPEVLCNNRGVDFVEAVADVELKCLNFYNPDDTIEGKFVPKKKNGVLTVQATSLKCGGIVLACIFDHRIADAYSANMFLISWAEIAQPTKPTTTTTTPCFRRSLLSPRRPSSIPRSLYDMYLPISRITPPQATTAPLLSRIYYVTAEQLEKMQSLVVMTNENNTKRTKFECFSAFLWKIVAQAASRGNKKGKKVIAKMGIVVDGRKRLCDGDKEKEALMGCYFGNVLSIPFGGKEVEELMEKPLGLVAEAVHEFLAVATKEHFLGLIDWVEAHRPEPGVAKIYCGGGSGDEGPSFVVSSGQRLMEGKMDFGWGEVVFGSFHFPWGGQAGYVMPMPSPLGNGDWVVYMHLAKEQLEVLESEASDVFRPISWDYLNQ* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2545 475 Pfam Transferase family 9 463 - -
Gso8g2545 475 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 469 - -
Gso8g2545 475 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 469 - -
Gso8g2545 475 Gene3D - 225 460 IPR023213 -
Gso8g2545 475 Gene3D - 9 219 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2545 Gso-Chr8 42765249 42768545 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2545 10 458 Monolignol Biosynthesis Gene Families AT5G48930 25.000 1.16e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2545 - - gmx:100777149 922.154