Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2542 ATGGTTCCTAATTTTCTCATTGCAAGGTTAGCTGTATCACTCACACACCACAGAAGTACCCATATCCAATTGGGTTCTCTGCTGCAACACAAACGCAATGCTTTCCTTCTTTTATTCAATTCATTCACTTCAGGAACCTCTTCTGATTCTGAATCAGATGGAAACCACCAAAAAGGTGGCACCTTTACTGTGTCTTACCTCATCAACTCATGTGGGGTGTCCCCAACACTGGCCAGGAAACTCTCCAATAAGGTCAATTTGAAAACCCCACATGGCCCAAATGCTGTTCTTGATCTTCTCAACAACTATGGGTTTGACAAAATCCAGGTTGCAAAACTTGTTGAGAAACACCCTTTGGTGCTTCTTGCGGATGCAGAGAATACCCTTTTGCCTAAACTCAAGTTCTTACGTTCTATTGGGGTTTCCAACACTGACATGCCTAAGATTTTAATTGCTAACCATAGCTTGAAGAGGAGCTTGAAAAAATTCTTCATCCCAAGATATGAGATCCTCAGACGTGTACTTGGTGATGATCAGGAAGTCGTTAGAGCTATAACAAGTTCCCGATTTGGTATTAATTATGGTGACGCAATGAACTTGGTTCCAAACATTGAGGTTTTGAGGCAGTCTGGTGTGCCCCAAGCTTCTATCTCTTTCATGATGATCCATTGTGGGACTGTAGCCTACTGGAAGCATTCCAGATTTGTGGAAGCTGTCAACACTGCTAAGGAAATCGGGTTTAATCCTTTGAGAACAAATTTTATTGTGGCCATTGAAATGCTTCTGATTAGCAGCAAAGCAGTATGGGAATCAAGGTTTAAGGTTTATGAGAGGTGGGGCTGGAACCGTGAAATGGCTCTTCAAGCATTTCGAAAGTTTCCCAATGTAATGAGGTTGTCAGAGGAGGCATTTAGCAAGAAAATGAATTTCCTAGTGAATGATATGGGTTGGCCATCAGAAGAAATCGCTGAGTATCCTCAAGTTGTAGCATACAACTTAGAGAAGAGGATTATCCCTAGATTCTCGGTAATCAAAATCTTGAAATCAAAAGGTTTGCTTGAGAATAATGTATCCTTTAGTTCCATTATATGCATAACTGAAGAAAAATTTCTGGAAAATTTTGTGATCAGTCTTCAGAAAGATTTGCCTGTCTTACCAGACCTCTATAGAGGTAAGATCAAGCCTTCAGATGTAATGTAG 1200 0.4058 MVPNFLIARLAVSLTHHRSTHIQLGSLLQHKRNAFLLLFNSFTSGTSSDSESDGNHQKGGTFTVSYLINSCGVSPTLARKLSNKVNLKTPHGPNAVLDLLNNYGFDKIQVAKLVEKHPLVLLADAENTLLPKLKFLRSIGVSNTDMPKILIANHSLKRSLKKFFIPRYEILRRVLGDDQEVVRAITSSRFGINYGDAMNLVPNIEVLRQSGVPQASISFMMIHCGTVAYWKHSRFVEAVNTAKEIGFNPLRTNFIVAIEMLLISSKAVWESRFKVYERWGWNREMALQAFRKFPNVMRLSEEAFSKKMNFLVNDMGWPSEEIAEYPQVVAYNLEKRIIPRFSVIKILKSKGLLENNVSFSSIICITEEKFLENFVISLQKDLPVLPDLYRGKIKPSDVM* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2542 399 Gene3D Transcription termination factor 3, mitochondrial 151 381 IPR038538 -
Gso8g2542 399 PANTHER CGI-12 PROTEIN-RELATED 47 393 IPR003690 GO:0003690|GO:0006355
Gso8g2542 399 Pfam mTERF 262 371 IPR003690 GO:0003690|GO:0006355
Gso8g2542 399 Pfam mTERF 97 248 IPR003690 GO:0003690|GO:0006355
Gso8g2542 399 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 47 393 - -
Gso8g2542 399 SMART mt_12 287 318 IPR003690 GO:0003690|GO:0006355
Gso8g2542 399 SMART mt_12 319 353 IPR003690 GO:0003690|GO:0006355
Gso8g2542 399 SMART mt_12 147 178 IPR003690 GO:0003690|GO:0006355
Gso8g2542 399 SMART mt_12 111 142 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2542 Gso-Chr8 42729134 42730682 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso8g2542 mTERF 4.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2542 K15032 - gmx:100775533 777.319