Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2541 ATGGTGCGTAATTTTCTTCTCATTGCAAGATTAACTACATCATTCACACACCACAGAAGTAACCCGATCCAATTGGGTTCTCTTCTGCAACACAAACACAATGCATCATTTTTTTTCTTCAATTCCTTCACTTCAGGAATCTCTTCTGATGCTGAATCAGACGATGAAAACCACCACAAAGGTGACACCTTTACTGTGTCTTACCTCATCAACTCATGGGGATTGTCCCCAAAACTAGCCAGTGAACTCTCCAATAGGGTCAATTTGAAAAACCCAGATGGCCCAAATGCTGTTATTAATCTTCTCAACAAATATGGGTTTGAAAAAACCCATCTTGCAAAACTTGCGGAGATAAAGCCCTCCGTCATTGCTGCAAATGCAGAGAATACCCTTTTGCCGAAACTCAAGTTCTTCCGTTCTATTGGGATTTCCAACGCTGACATGCCTAAAATCCTAATTGCTAGCCATCATATGTTGTTTAGAAGCTTGGACAAATGCCTCATTCCACGGTATGAGATTCTAAGTAGTTTACTTCGTGACAAAGGGGAAGTTGTTAGAGCTTTGAAAAATGCCCCATTTGGTTTTACGTATGTTGACATGATGACACACTTGGTTCCAAACATTAGGGTTTTGAGGGAATCTGGCGTGCCTCAAGGTTCCATATCTTACCTGTTGATGCATTCTGGGACTCTAGCCTACAGGGACCATTCCAAATTTGTGGAAGCTGTTAACACTGCTAAGGAATTTGGGTTTAATCCTTTGAAAAGAACTTTTGTCGTGGGTGTTGAAGTTCTTGCCAATAAGAGCAAAGCAGTATGGGAATCAAGGTTTGAGGTTTATGAGAGGTGTGGCTGGAACCGCGAAATAGCTCTTGGAGCAGTTCGAAAGTTTCCCAGTATTGTGAAGTTGTCAGAGGAAGTGTTTATAAAAAAAATGAGTTTCCTAGTGAAGGATATGGGTTGTTCATCAGAAGATATTGCTGAATATCCTCAAGTTGTAACGTACAACTTGGAGAAGAGGATTATCCCTAGATTCTCGATAATCAAAATGTTGAAATCAAAAGGTCTGCTCAAGAAAAATTTGCACTTCAGTGCCATTATTTGCATAACCGAGGCAAATTTTTTGGAGAAATTTGTCATCAATTTTCAGAAAGATTTGCCTTTCTTGCCAGATTACTACAACAGTTTGGCAAATCAACAGAATGTATTATAG 1212 0.3969 MVRNFLLIARLTTSFTHHRSNPIQLGSLLQHKHNASFFFFNSFTSGISSDAESDDENHHKGDTFTVSYLINSWGLSPKLASELSNRVNLKNPDGPNAVINLLNKYGFEKTHLAKLAEIKPSVIAANAENTLLPKLKFFRSIGISNADMPKILIASHHMLFRSLDKCLIPRYEILSSLLRDKGEVVRALKNAPFGFTYVDMMTHLVPNIRVLRESGVPQGSISYLLMHSGTLAYRDHSKFVEAVNTAKEFGFNPLKRTFVVGVEVLANKSKAVWESRFEVYERCGWNREIALGAVRKFPSIVKLSEEVFIKKMSFLVKDMGCSSEDIAEYPQVVTYNLEKRIIPRFSIIKMLKSKGLLKKNLHFSAIICITEANFLEKFVINFQKDLPFLPDYYNSLANQQNVL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2541 403 SMART mt_12 149 180 IPR003690 GO:0003690|GO:0006355
Gso8g2541 403 SMART mt_12 291 322 IPR003690 GO:0003690|GO:0006355
Gso8g2541 403 SMART mt_12 113 144 IPR003690 GO:0003690|GO:0006355
Gso8g2541 403 SMART mt_12 323 357 IPR003690 GO:0003690|GO:0006355
Gso8g2541 403 Pfam mTERF 99 252 IPR003690 GO:0003690|GO:0006355
Gso8g2541 403 Pfam mTERF 270 374 IPR003690 GO:0003690|GO:0006355
Gso8g2541 403 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 29 395 - -
Gso8g2541 403 Gene3D Transcription termination factor 3, mitochondrial 174 386 IPR038538 -
Gso8g2541 403 PANTHER CGI-12 PROTEIN-RELATED 29 395 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2541 Gso-Chr8 42722447 42725832 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso8g2541 mTERF 1.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2541 K15032 - gmx:100806920 793.882