Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2540 ATGGATGAATGGAGAAGAAAAAACACCGGCTTTGGCTCCAAAGAGATTCATCAATCATCAGATACATCAAATGCTGTCCTTAGTCTTCTGAAAACCTACGGATGCTCCGAAAGCCAGTTCTCTGTCTTGCCAAGAGATGGAAACCACCATAAAAGTGGCACCTTTACTGTGTCTTACCTCATTAACTCATGTGGGGTGTCCCCAAAACTGGCAAGGGAACTCTCCAACAGGGTCAATTTGAAAAACCCTGATGGCCCAAATGCTGTTCTTGATCTTCTCAAGAATTATGGGTTCTGCAAAACAAAACTTGCAAAACTTGTTGGGAGACATCCTTTAGTGCTTGTTGCAGATGCAGAGAATACCCTTTTGCCTAAACTCAAGTTCTTTCGTTTTATTGGGGTCTCCGACGCTGGCATGCCTAAAATCCTGATTGCTAATAGTTCTATCTTGAAGAGGAACTTGGAAAAATGCCTCATCCCACGTTATGAGATCCTAAAGAGTGTACTTTGTGATGATCGGGAAGTTGTTAGAGCTTTGAGAAATTCCCCTCTTGGTTTTATATATGGTGACTTAGTGAATGCCTTGGTTCCAAACATTAAAATTTTGAAGCAATGTGGTGTGGCTCAGGCATCCATATCATTACTAATAACCATTGCTCTGTCTGCAGCGTATGTGAAGCATTCCAGATTTGTGGAAGCAGTCAAAACAGTTAAGGAAATTGGGTTTAGTCCTTTGAAAAATAATTTTGTCGTGGCTATTTCTGTGCTTGTAACTATGAGGAAATCAGTCTGGGATTCAAGGTTTGAGGTTTACCAGAGGTGGGGCTGGAACCATGAAATGTCTCTTCGAGCATTTAGAAAGTTTCCTGGTTTTATGATATTTTCAGGGGAGACTTTTACCAAGAAAATGAGTTTCCTGGTGAAGGATATGGGTTGGCCATCAGAAGCTATTGCTGAATATCCTCAAGTTGTAGCGTACAGCTTGGAGAAGAGAATTATCCCTAGATTCTCAGTAATCAAAATCTTGAAATCAAAAGGTGTGCTAACATGTACATTAGTTCCATTATTTGCATAA 1074 0.405 MDEWRRKNTGFGSKEIHQSSDTSNAVLSLLKTYGCSESQFSVLPRDGNHHKSGTFTVSYLINSCGVSPKLARELSNRVNLKNPDGPNAVLDLLKNYGFCKTKLAKLVGRHPLVLVADAENTLLPKLKFFRFIGVSDAGMPKILIANSSILKRNLEKCLIPRYEILKSVLCDDREVVRALRNSPLGFIYGDLVNALVPNIKILKQCGVAQASISLLITIALSAAYVKHSRFVEAVKTVKEIGFSPLKNNFVVAISVLVTMRKSVWDSRFEVYQRWGWNHEMSLRAFRKFPGFMIFSGETFTKKMSFLVKDMGWPSEAIAEYPQVVAYSLEKRIIPRFSVIKILKSKGVLTCTLVPLFA* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2540 357 PANTHER CGI-12 PROTEIN-RELATED 48 348 IPR003690 GO:0003690|GO:0006355
Gso8g2540 357 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Gso8g2540 357 SMART mt_12 247 277 IPR003690 GO:0003690|GO:0006355
Gso8g2540 357 SMART mt_12 282 313 IPR003690 GO:0003690|GO:0006355
Gso8g2540 357 SMART mt_12 314 348 IPR003690 GO:0003690|GO:0006355
Gso8g2540 357 SMART mt_12 176 208 IPR003690 GO:0003690|GO:0006355
Gso8g2540 357 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Gso8g2540 357 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 48 348 - -
Gso8g2540 357 Gene3D Transcription termination factor 3, mitochondrial 145 352 IPR038538 -
Gso8g2540 357 Pfam mTERF 90 252 IPR003690 GO:0003690|GO:0006355
Gso8g2540 357 Pfam mTERF 264 353 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2540 Gso-Chr8 42718577 42720268 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso8g2540 mTERF 5.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2540 K15032 - gmx:100806386 709.909