Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2536 ATGGCGGAAATGGCAGTGTCCTTCGCTCGAGACAAATTGCTTTCACTACTAAGCAATGAAGCAAAACTCCTTTGGGACTTGCACACAGAATTTGCAGAAATAAAAACTGAACTGGATTTCATTCAAGCCTTCCTCAAGGATGCAGATAGAAGGGCTGAAGAAGAAGGAGACAGCACTAATGAGGGGATCAGAACATTGGTTAAACAGTTGAGGGAAGCCTCTTTTCGCATAGAAGATGTGATTGATGAGTACTTGATCTTTGTGGAACAACAGCCTGATGCTCTTGGATGTGCAGCTTTATTCTTTGAGTGTGACATTACACACTTCATTGAATATTTGAAACGTCGCCACCATATAGCATCAGAGATTCAGCAGATTAAGTCAGTTGTTGATGGTATCATGCAGAGAGGTAAAAAATATAACTTCCTTAGACAACCTTCTGTAGAACAAGGACAGAGCAGTAATGCAGGTAGCCAAAGTATTCAGTGGCATGACCCTCGAATCGCTTCTCGTTACCTTGATGAAGCTGAAGTTGTTGGCTTTGAAGGCCCAAGAGATGAATTGATTGATTGGTTAGTAGAGGGACCAGCAGAGCGCACTGTCATCTCTGTGGTAGGAATGGGAGGGCTTGGAAAAACCACTCTTGCCAGCAGAGTTTTCAACAACCAAAAGGTGGTTGGACACTTTGATTTCCATGCATGGATCACAGTGTCTCAATCCTACACAGTGGAAGGGATGATGAGAGACTTGTTGAAGAAGTTATGCAAAGAAAAAAGGGAGAATCCTCCTCAAGATATTTCTGAAATGGACCGAGATTCATTGATCGATGAAGTGAGAAACTATTTGCAACAGAAGAGGTATGTTGTCATTTTAGATGATGTATGGAGTGTAGAACTTTGGGGTCAGATTAAAAGCGCCATGTTTGATAATAAAAATGGAAGTAGAATATTAATCACAACTAGGAAGACAGGTGTTGTAGAATCTTGTAAGAACTCTCCCTTTGATAAGGTGCATGAGCTGGAACCTTTATCATCAGAAAAATCTATGGAACTCTTTTATAAAAAGGCATTTCAATTTGATTTCAATGGATGTTGCCCAGACCATCTCCTGAATATATCTTCTGAAATTGTTAAAAAATGCAAGGGCTTACCACTTGCAATTGTGGCTATTGGTGGCCTTTTATCTGGCAAAGAAAAGACTACATTTGAATGGGAGAAAATTAGGCAAAGCCTAAATTCAGAGATGGAGAAAAACCACCATTTAATTGGTATAACAAAGATTTTAGGTTTCAGTTATGATGATTTGCCATACTACCTTAAATCATGCTTATTGTATTTTGGAATATATCCGGAAGACTATAAAGTGAAATCAACAAGACTAATTCGACAATGGGTGGCTGAAGGATTTGTAAAAGATGAAGGAGGAAAAACTTTGGAAGATGTTGCACAACAATATTTAGCAGAGTTGATTGGTAGAAGTTTAGTTCAAGTGTCTTCTGTTACCGTAGATGGAAAAGCCAAGAGTTGTCATGTTCATGACTTATTATGGGATATGATCCTTAGAAAATTTAAGGATTTAAGTTTCTGCCAGCATATTAGTAAAGAAGATGAGTCAATGTCAAGTGGGATGATTCGGCGCTTATCAATAGCAACCAATTCCATTGATTTAGTAGGGAGTACTGAAAGCTCACACATCCGATCACTACTTGTTTTTTCTGGCAAAGAATCAGCATTAACTGATGAATTTGTGCAAAGAATCTCTAAGAAATGCAGGCTATTGAAGGTACTTGATTTTGAAGATGGTCGATTGCCTTTTGTTCCTGAAAATTGGGAAAATCTAGTACACTTGAAGTATTTAAGCTTAAGGCCGTTAGGGATGGAAACTAAAAGTCTTACAAAATTCATTGGTAAGCTCCATAACCTCGAAACGCTGGACGTAAGACATGCAACTTCTATGGAATTGCCAAAGGAAATTTGCAAGCTTACAAGGCTGAGACATCTTTTGGGTGATCATATGAGGTTGTTTCAATTGAAAAATAGTTTTGGAGACATGACATCCCTACAAACACTGCATCAAGTAAACGTAGATCCTGATGAAGAAGAGCTAATTAATGATGATGATGTTGTGGAGTTAATCAGAGAATTGGGAAAGCTGAAGAATTTAAGGAGCTTAGGCTTGACTGGTGTGAAGGAAGGACTAGGAAGTGCTCTATGTTCATCAATAAATCAGATGCAAAACTTGGAGAAACTACATATTCGCTCAGCATCTAATTTTTATGGTTTTTATATGATTGATTTGCCTGTCATTTCATCCCTACCTATGTTGCGGAAACTTAAGCTAGAAGGGAAGTTAAATAAGTTTCCAGAGTGGATTCCACAACTACAAAATCTTGTAAAATTGACTTTGATATGTTCCCACTTAACAGAAGATCCATTGAAATCACTACAGAATATGCCACATTTGTTGTTCCTCCGTATTGGCCCCTTAGCCTATGGAGGTGAAAGTTTGTATTTTAAAGATGGAGGGTTTATGCAATTAAAAGAACTGTATCTCAGGTATTTATCTAACTTGAGTTCCATCATCATCGATAAAGGATCACTGAATTCTTTGGAAACACTACACTTTGAGGGAATAGGTGCACTCAAGACAGTACCTTGTGGCATCCAACACTTAGAAAATCTTCTAGTTCTTCACATACTTGACATGCCATCTGAATTCGAGCAATGCATTGCTCCCGAAGGAGGACCAGAGCACTCAAGTATACAACATGTGCCCCTTGTAAGAATTGCTACCAGTTTTGGAAGAAAACGCATTATTCATCACTCAAAGTCAAGACATTAG 2841 0.384 MAEMAVSFARDKLLSLLSNEAKLLWDLHTEFAEIKTELDFIQAFLKDADRRAEEEGDSTNEGIRTLVKQLREASFRIEDVIDEYLIFVEQQPDALGCAALFFECDITHFIEYLKRRHHIASEIQQIKSVVDGIMQRGKKYNFLRQPSVEQGQSSNAGSQSIQWHDPRIASRYLDEAEVVGFEGPRDELIDWLVEGPAERTVISVVGMGGLGKTTLASRVFNNQKVVGHFDFHAWITVSQSYTVEGMMRDLLKKLCKEKRENPPQDISEMDRDSLIDEVRNYLQQKRYVVILDDVWSVELWGQIKSAMFDNKNGSRILITTRKTGVVESCKNSPFDKVHELEPLSSEKSMELFYKKAFQFDFNGCCPDHLLNISSEIVKKCKGLPLAIVAIGGLLSGKEKTTFEWEKIRQSLNSEMEKNHHLIGITKILGFSYDDLPYYLKSCLLYFGIYPEDYKVKSTRLIRQWVAEGFVKDEGGKTLEDVAQQYLAELIGRSLVQVSSVTVDGKAKSCHVHDLLWDMILRKFKDLSFCQHISKEDESMSSGMIRRLSIATNSIDLVGSTESSHIRSLLVFSGKESALTDEFVQRISKKCRLLKVLDFEDGRLPFVPENWENLVHLKYLSLRPLGMETKSLTKFIGKLHNLETLDVRHATSMELPKEICKLTRLRHLLGDHMRLFQLKNSFGDMTSLQTLHQVNVDPDEEELINDDDVVELIRELGKLKNLRSLGLTGVKEGLGSALCSSINQMQNLEKLHIRSASNFYGFYMIDLPVISSLPMLRKLKLEGKLNKFPEWIPQLQNLVKLTLICSHLTEDPLKSLQNMPHLLFLRIGPLAYGGESLYFKDGGFMQLKELYLRYLSNLSSIIIDKGSLNSLETLHFEGIGALKTVPCGIQHLENLLVLHILDMPSEFEQCIAPEGGPEHSSIQHVPLVRIATSFGRKRIIHHSKSRH* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2536 946 Gene3D - 432 522 IPR036388 -
Gso8g2536 946 PANTHER DISEASE RESISTANCE PROTEIN RP 30 906 IPR044974 GO:0006952
Gso8g2536 946 Gene3D - 342 431 IPR042197 -
Gso8g2536 946 Gene3D - 4 120 - -
Gso8g2536 946 PRINTS Disease resistance protein signature 201 216 - -
Gso8g2536 946 PRINTS Disease resistance protein signature 281 295 - -
Gso8g2536 946 PRINTS Disease resistance protein signature 380 394 - -
Gso8g2536 946 PRINTS Disease resistance protein signature 636 652 - -
Gso8g2536 946 CDD RX-CC_like 2 133 IPR038005 -
Gso8g2536 946 Gene3D Ribonuclease Inhibitor 559 925 IPR032675 -
Gso8g2536 946 Pfam NB-ARC domain 185 434 IPR002182 GO:0043531
Gso8g2536 946 Coils Coil 943 946 - -
Gso8g2536 946 PANTHER - 30 906 - -
Gso8g2536 946 Gene3D - 168 333 IPR027417 -
Gso8g2536 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 446 IPR027417 -
Gso8g2536 946 Pfam Rx N-terminal domain 5 92 IPR041118 -
Gso8g2536 946 SUPERFAMILY L domain-like 511 906 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2536 Gso-Chr8 42665875 42669487 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2536 196 399 WRKY Transcription Factor Family AT5G45050 26.471 1.67e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2536 K13457 - gmx:100819372 1883.61