Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2535 ATGCATCATTTTCTGTTTGCAAGATTAACTACTAGAACACTCCATTATAGTGTTCTCTTACACAATGTTACGCCTTTCTTCACTTCACGCACTCTATCTGTATCAAGCACAAATCATCGCAAAGATGGCACCTTTAATGTATTTAGCCTCATCAACTCATGTGGGTTGTCCCCTGAAGTGGCCCTGAAACTCTCCAGAAGGTTGGAATTGAAAAACCCAGATGGGCCAAACGCTGTAATTGAGATTCTCAGGAACTATGGGTTTTCTGATACCCAGCTATGTAGCCTTGTAAAGAAAATCCCTTTGGTGCTTTTGTCAAAACCTGAAAAGACCCTTTTGCCAAAACTCAAGTTCTTCCTTTCTATTGGGTTTTCAACCACTGACCTTCCCAGATTCCTCATTGGAAACACTACATTTTTGGGATTGAGCTTGCACAAAACCATTATCCCCCGTTACCAGATCATCAAGAGTCTAGTTCACAGTGATAAAGAAGTAGTTTCCACTTTGAAGAATGATAGGAGGTACTTTAACCGTTGGATGTCAATCGATGCGGTTCGAAATGTAGGGACTTTGAGACACCTTGGGGTGCCTCAACGTTCCATTTCGTTATTGGTAACCAATTTTCCTAGTGTAACATTTATGGAGCATTCGAGGTTTGTTGAGGCTGTGGAGAAAGTGAAGGTAACTGGGTTTGATCCTTTGAAATCAAATTTTGTATTGGCAATTCAAGTGCTTGCAAAGATGAATGAGGCAATGTGGGAATCCAAATTAATGGTTTTTGAGAAGTGGGGATGGTCCAGAGATATCTGTCTTTTAGTTTTCAAAAAGCATCCCCAATTTATTATGTTGTCAGAAGAGAAGATTATGAAAATATTGAACTTCTTGATGAAAGACATAGGTTTGCCCGTAGAGAACATCGCTGGATGCCCTGAGGTTCTTAAATGCAACCTGGAGAAGACAGTTATGCCTAGATTTGCAGTTGTTGAAATTTTGAAGTCAAGGGGTTTGATAAAGAGAGATTCTAAAATAAGTAGCTTTATCAAGATCAGCGAGAAAATGTTTTTGGAGAAATATGTGATCCGATTTCTAAAAAATGAGCCACTACTACTGGATGCATACAGAGGTCAGAAGTCAAACTACGAAGAATACGTTGAAGGAAGCATAATCCTTCAAACTCAAAACTGGGTGAGTCAAAATTCATTACCAATGTACCATTTTCTTATTGCTAGATTAACAACTAAGACACCCCATTATGGTGTTCTCTGTCACAATGCAATTCTTTTCTTCAATTCACGTACTCTTTCTGTATCAAACACAAATCACTACAAAGGTGGCACCTTCAATGTATTTAGCCTCATCAACTCATGTGGGTTGTCCCCAGAAAAGGCACAGAAACTCGCCAATAGGTTGAAATTGAAAAACCCTAATGGGCCAAATGCGGTAATTGATATTCTCAGGAACTATGGATTCTCTGAGACTCAGCTATGTAGCCTTGTAAAGCAACGCCCTTTTGTGCTTTTGTCAAAACCTGGAAAGACCCTTTTGCCAAAACTCAAGTTCTTCCATTCTATTGGGTTTTCAACCACTGACCTTCCCAGATTCCTCATTGGAAACATTACATTATTTTATTTTAGCTTGAATAAATCCATTATCCCATGTTATCAGATTATCAAAGGTCTAGTTTGCAGTGATAAGGAAGTAGTTTCCACTTTAAAGCATTATAAGTGGTCCTGTAGCAGTCGAAGGTTAATTAACCATTCAGTTAGAAATGTAGGGGCTTTGAGACAGCTTGGGGTGCCACAACGTTCCGTTTCCTTGTTAGTAACTAATCATCCTGGTGCAACATTTATGAAGCATTCAAGATTTGTTGAGGCTTTGGAGAAAGTGAAGGAAATGGGGTTTGATCCTTTGAAATCAAATTTTGTTATGGCACTTAAATTGTTTGCAACGATAAATGAAGCAACGTGGAAATCAAAATTAGAGGTTCTTGGGAGGTGGGGCTTTTCTAGAGATATCTGTCTTTTGGCTTTCAAAAAGCAACCCCAGTTTATGATGTCGTCGGAAAAGAAGATTATGAAAATGTTGAACTTCTTGGTGAAAGATATGAGTTTGCCCCCAGAAGACATTGCTAGATGCCCTGAAATTCTTGGATGCAACTTGGAGAAGACAGTTATTCCTAGATTTGCAGTTGTTAAAAATTTGAAGTCAAGGGGTTTGATAAAGAGTGATCTGAAAACAAGTTCCTTTATTAAGATAAGTGAGAAAATGTTTTTGGAGAGATATGTGACCCGATTTCAGAGAAATGAGCCACTACTATTGGATGCATACAGAGGTCAGAAGTGA 2343 0.3871 MHHFLFARLTTRTLHYSVLLHNVTPFFTSRTLSVSSTNHRKDGTFNVFSLINSCGLSPEVALKLSRRLELKNPDGPNAVIEILRNYGFSDTQLCSLVKKIPLVLLSKPEKTLLPKLKFFLSIGFSTTDLPRFLIGNTTFLGLSLHKTIIPRYQIIKSLVHSDKEVVSTLKNDRRYFNRWMSIDAVRNVGTLRHLGVPQRSISLLVTNFPSVTFMEHSRFVEAVEKVKVTGFDPLKSNFVLAIQVLAKMNEAMWESKLMVFEKWGWSRDICLLVFKKHPQFIMLSEEKIMKILNFLMKDIGLPVENIAGCPEVLKCNLEKTVMPRFAVVEILKSRGLIKRDSKISSFIKISEKMFLEKYVIRFLKNEPLLLDAYRGQKSNYEEYVEGSIILQTQNWVSQNSLPMYHFLIARLTTKTPHYGVLCHNAILFFNSRTLSVSNTNHYKGGTFNVFSLINSCGLSPEKAQKLANRLKLKNPNGPNAVIDILRNYGFSETQLCSLVKQRPFVLLSKPGKTLLPKLKFFHSIGFSTTDLPRFLIGNITLFYFSLNKSIIPCYQIIKGLVCSDKEVVSTLKHYKWSCSSRRLINHSVRNVGALRQLGVPQRSVSLLVTNHPGATFMKHSRFVEALEKVKEMGFDPLKSNFVMALKLFATINEATWKSKLEVLGRWGFSRDICLLAFKKQPQFMMSSEKKIMKMLNFLVKDMSLPPEDIARCPEILGCNLEKTVIPRFAVVKNLKSRGLIKSDLKTSSFIKISEKMFLERYVTRFQRNEPLLLDAYRGQK* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2535 780 Pfam mTERF 80 296 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 Pfam mTERF 248 355 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 Pfam mTERF 482 698 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 Pfam mTERF 695 757 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 SMART mt_12 674 705 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 SMART mt_12 605 635 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 SMART mt_12 303 337 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 SMART mt_12 496 527 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 SMART mt_12 532 563 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 SMART mt_12 202 232 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 SMART mt_12 706 737 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 Gene3D Transcription termination factor 3, mitochondrial 140 365 IPR038538 -
Gso8g2535 780 Gene3D Transcription termination factor 3, mitochondrial 539 768 IPR038538 -
Gso8g2535 780 PANTHER CGI-12 PROTEIN-RELATED 21 376 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 PANTHER CGI-12 PROTEIN-RELATED 423 779 IPR003690 GO:0003690|GO:0006355
Gso8g2535 780 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 423 779 - -
Gso8g2535 780 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2535 Gso-Chr8 42659641 42665399 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso8g2535 mTERF 4.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2535 K15032 - gmx:106799612 1509.58