Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2522 ATGAATGAGCAGCAAAGGATCACTGATGTTGCTTCTTCCTCTAACTCTTCATCTATGTCATCTTCTAAACAATATGATGTTTTCCTGAGCTTTCGAGGTGAAGACACTCGAAGGAGCTTCACAAGCCATCTATATGAATCTTTGAATGAAGTGAAAGTCCAAACCTATATAGATGATCGACTTGAAAAGGGAGAAGAAATCTCACCTACACTCACCAAAGCCATCGAAAATTCTCGTGTATCTATTGTCATTTTCTCAGAGAACTATGCTTCCTCAAAGTGGTGCTTGGGTGAACTCATCAAGATTATGGAAAGCAAGAAAGAAAAAGGACAGATTGTGATTCCAGTTTTCTACAACATAGACCCATCCCATGTGAGGAAGCAGACAGGGAGCTATGAGCAAGCCTTTGAAAAACATGAGGGAGAACCCAGATGCAACAAATGGAAAACTGCTCTCACTGAAGCAGCCGGTTTAGCTGGGTTTGACTCTCGAAATTACAGGACTGATCCTGAATTACTTAAGGACATTGTTGGAGCTGTTTTGCGAAAATTGCCTCCTAGATACCAAAACCAACGTAAAGGACTGATTGGAATTGAGGACCATTGTAAACAGATTGAGTCGTTACTAAAAATTGGTTCAAGTGAAGTTAAAACCCTTGGAATATGGGGTATGGGTGGTATAGGTAAAACCACCCTTGCTACTACTTTATATGACAAACTGTCTCATAAGTTTGAAGATGCTTGCTTCCTCGCAAACTTGAGTGAACAATCAGACAAGCCCAAAAATCGTAGTTTTGGTAATTTTGATATGGCTAACTTAGAGCAATTAGATAAAAATCATAGTAGGCTTCAAGATAAAAAAGTTCTCATTATCCTAGATGATGTCACTACCTCAGAGCAATTAGATAAAATAATTCCAGATTTTGATTGTGATTTCTTGGGACCAGGAAGTAGAGTCATTGTTACAACAAGAGATAAACAAATACTTAGCCGAGTTGATGAAATATATCCGGTTGGGGAATGGAGCTTTGATAAGTCTCTTCAGCTTTTCTGTTTGACTGCTTTTGGAGAAAAACAACCTAATGATGGCTATGCGGATCTATCAAGAATGGTGGTTTCCTATTGCAAAGGTATTCCTTTGGCTTTAAAAGTCTTGGGTGCAAGTCTTCGATCAAGAAGTAAAGAAATCTGGGAATGTGAATTGAGAAAACTTCAGAAGATTCCAAATAAGGAAATTCATAAAGTATTAAAACTAAGTTATGATGGCTTAGATCGTTCGGAGCAGGACATATTTCTAGACATTGCATGTTTCTTCAAAGGACGAGATAGATGTTGGGTAACAAGAGTACTGGAAGCTTTTGAGTTCTTTCCAGCACCTGGGATAAACATCCTTTTAGATAAAGCTCTCATAACAATTTCAGATAGCAATCTGATATTAATGCATGACTTGATACAAGAAATGGGTCGAGAAATTGTTCATCAAGAATCTAAAGACCCAGGAAGACGAACCCGATTATGGAGACATGAGGAAGTGCACGATGTATTGAAATATAACAAGGGAACTGATGTTGTTGAAGGCATAAGTTTAGATTTGTCTAGATTAAATGAGGATCTAAATTTGAGCTCCAATTCCCTTGCAAAGATGACTAACTTGAGATTTCTTCGAATTGATGGAGAAAGCTGGCTGAGTGACAGAATTTTTAACGGGTACCTTCCTAATGGTCTTGAATCATTGTACCTTTCTAATGATGTTGAGCCATTGTACTTTCCTGGTCTTGAGTCACTAGTACTGTACTTTCCTAATGGTCATGTGTCATCGTACCTTCCTAATGGTCTTGAGTCATTTTACTTTCTTGATGGTCCTGTGTCATTGTACCTTCCTAATGGTCTTGAGTCATTGTACTTTCCTAGTGGTCTTGAGTCATTGTCTAATCAACTAAGGTACCTTCACTGGGATCTATGTTATCTTGAGTCTTTGCCACCTAACTTTTGTGCTGAACAGCTAGTAGTGCTTCACATGAAATTTAGCAAGCTTAAAAAGCTTTGGGATGGGGTTCAGAATCTTGTAAATTTGAAGGAAATTGACCTTTCGTATTCCGAAGACCTCATTGAGATCCCAAACTTATCTGAAGCAGAAAATCTTGAAAGCATTTCACTTTCAGGTTGCAAAAGCTTGCATAAACTCCATGTTCATTCAAAATCTCTCCGTGCAATGGAACTTGATGGTTGTTCATCTCTCAAGGAATTCTCAGTAACATCAGAGAAAATGACAAAATTGAACTTATCTTACACCAATATAAGTGAATTGTCATCATCAATTGGTCACTTGGTGTCTTTAGAAAAGTTATACTTAAGGGGAACTAATGTTGAGAGCTTGCCTGCAAATATCAAAAACCTTTCAATGCTGACAAGCCTTCGGCTAGATGGTTGCAGGAAACTCATGTCTCTACCGGAGCTTCCACCATCCTTGAGATTGCTTGATATAAATGGTTGTAAGAAGCTCATGTCACCATCCCAAAGACACAACATAAAACTTAAGAAAATATATAAATATGTACTAAAAAAAATTTCTATATTGTTTTCTATATTGTTTTATGTAGTTTTATGTACAATTATGTTATCTCTTTTTATTCAAATTAAAATACACCCGAATTTCACAAGCCATCTATATAAATCTTTGAATGAAGAAAAAGTCCAAACCTATATAGATGATCAACTTGAAAAGGGAGATGAAATCTCACCAGCACTCACCAAAGCCATCGAAGATTCTCATGTATATATTCTAATTTTCTCAGAGAACGATGCTTCCTCAAAATGGTGCTTGGGTGAACTCATCAAGATTATGGAATGCAAGAATGAAAAAGGACAAATGGTAATACCAGTTTTCTACAACGTAGATTCATCCCATGTGAGGAAGCAGACAGGGAGCTGTGAGCAAGCCTTTGAAAAACATGAGGGAGAACCTAGGTGCAAGAAATGGAAAGCTGTTCTCACTGAAGCATTCAATTTAGCTGGGTGGAACTCTCGAACTTATAGGACTGATCCTGAATTACTTAAGGACATAGTTGGAGATGTTTTTCGAAAATTGCCTCCTAGATACCAAAACCAACGTAAAGGACTAGTCGGGATTGAGGAACATTGTAAAAAGATTGAATATTTACTAAAAATTGGGCAAAGTGAAGTTAAAACCCTTGGAATATGGGGCATGGATGGCATAGCCTTAATTGGTAATATTTGGTGTTCTACCTATGAAGATGGCATAGAGGTCAGCTGGGACAGAAGTCTTTCATCTGCCACCATAAAGTCTGTCCCTGAAGCAAAAAAGAAAATGTCTATTCGAACAAATCGCTTTAAAGCAGTGGATAGAGTGTTGAAGGATCTGGAGAGAGTAGAAAAAGAAGGGAAATTGAATGATTTGAAGTCTGAGTTGAACAAGATAAAGGAGGTGTTTTTGAAGGTGAAGGAGAATGAAGAAGAACTCCTTGACACTTGCTGCCAGCTGCCAGCTGCTGCCTCATCTGGACAATCATCTCATCATGCTCAAGCTGCTCTCTCATCTGGACAATCATCTCATCATGTCACTCCACTCCCTTCTTCCACCACTCCACAACTTCATCAGGAGGAGGACTTGCAAATTATTAAGGACTATTGTAACAACCTTGATCCTTATGACAAACGTTGCTTCTCATCTCTCATCTTGCAGTTTCCTGAAAATGCTGTTTTCAAGAGAAGGGAATTAATCGCTCTCTGGTTCTCTCGGTATGGTGATTATATTTGGCCTGCAGAGAAACGGGTTGATCCTCTTTTGAGAAGTAAAGTAATTGTACCCCATGGTAATGGCAAGTCTCCCATTGCGAGTAAATTTAAAATTAATCCGTTGGTCCGTCACAAGTCACTAAGTCCATTGTTTCAAAATGAGGAAGTGCCGATTTGTGGTTATTATTCACAAATAAAGACCTCATCTTCATCTCGTGCCAGTGATATTGGGTATGAACGTTTAGTACTTGACCAACGTAAAATTAAATTAAGTGATGGCTTTGGCTTTAAATCTAACCGTTGCTTTTATATTCATAATGTTGGTGCAAGTTATCTTAATTTTGGACCCGGATGGATGGCCAAAATGAAGGATTTGCAGGTGCTTCAACTTGGTCGTTGGACGAAAGATTCACCAAAACATCATATTGAAGTGGACAGTGAAGAATTCCTCAAGGAGTTGAGTGGTCACGAGTATTTCAGATGTCTTAGCCTTCGAGGGATATCAAGAATATTCGAGCTTCCACCTTCCATCGTAAAAATTGAGAGCCTAGAAACTCTAGATCTCAAGGCCTGTCACAATCTAGAAACGCTACCTAGTGATATTTCATCATTGCAAAGTCTCTGGTATTTGAATTTGTCTGAGTGCTACTTGTTGGACAGAATGCCAAAGGGGATTGAGAACCTGACTGTGCTTAGGGTACTGAAGGGATTTGTATTAGGTAGTTCTAGCAAGACTCCCTGCCGAATATCTGATATTGCTGCAAGATTGAAAAGACTAGAGCGACTCAGCATACGTATAGGAAGTGGGGCCGTGATCCAAGATGGGGAGTTTGAAAGCTTGGAAGAGTTGTCAAAACTAGAGCATCTAAAAATATCATGGGGTGTATTTGACACAAGGTACATTGATATTCAGATAAGTGTGCCTTCAAGTTTGAAAAAGTTGCATCTTGAAGGCTTTCCTGGCCAAAATATTCCAGAATGGTTGAAGCCTAGCAAACTACCTCAAGAATTGGAATTGAGAGAGCTACATATAACAGGAGGAAAACTCGAAAGTTTGGATCATGGTGAAAATAATGATTGGGGTGTGGAGATGGTGTATCTCAAGTACCTAAAGGATTTGGATGTTGACTTGGAACATTTGAGAAAGTTGTTTCCTTCTCTAAGGTACGTAGAAATAAAACAAATCTTAAACCAGCCATACCTTGAATGGAGCATTAATTGA 4977 0.3852 MNEQQRITDVASSSNSSSMSSSKQYDVFLSFRGEDTRRSFTSHLYESLNEVKVQTYIDDRLEKGEEISPTLTKAIENSRVSIVIFSENYASSKWCLGELIKIMESKKEKGQIVIPVFYNIDPSHVRKQTGSYEQAFEKHEGEPRCNKWKTALTEAAGLAGFDSRNYRTDPELLKDIVGAVLRKLPPRYQNQRKGLIGIEDHCKQIESLLKIGSSEVKTLGIWGMGGIGKTTLATTLYDKLSHKFEDACFLANLSEQSDKPKNRSFGNFDMANLEQLDKNHSRLQDKKVLIILDDVTTSEQLDKIIPDFDCDFLGPGSRVIVTTRDKQILSRVDEIYPVGEWSFDKSLQLFCLTAFGEKQPNDGYADLSRMVVSYCKGIPLALKVLGASLRSRSKEIWECELRKLQKIPNKEIHKVLKLSYDGLDRSEQDIFLDIACFFKGRDRCWVTRVLEAFEFFPAPGINILLDKALITISDSNLILMHDLIQEMGREIVHQESKDPGRRTRLWRHEEVHDVLKYNKGTDVVEGISLDLSRLNEDLNLSSNSLAKMTNLRFLRIDGESWLSDRIFNGYLPNGLESLYLSNDVEPLYFPGLESLVLYFPNGHVSSYLPNGLESFYFLDGPVSLYLPNGLESLYFPSGLESLSNQLRYLHWDLCYLESLPPNFCAEQLVVLHMKFSKLKKLWDGVQNLVNLKEIDLSYSEDLIEIPNLSEAENLESISLSGCKSLHKLHVHSKSLRAMELDGCSSLKEFSVTSEKMTKLNLSYTNISELSSSIGHLVSLEKLYLRGTNVESLPANIKNLSMLTSLRLDGCRKLMSLPELPPSLRLLDINGCKKLMSPSQRHNIKLKKIYKYVLKKISILFSILFYVVLCTIMLSLFIQIKIHPNFTSHLYKSLNEEKVQTYIDDQLEKGDEISPALTKAIEDSHVYILIFSENDASSKWCLGELIKIMECKNEKGQMVIPVFYNVDSSHVRKQTGSCEQAFEKHEGEPRCKKWKAVLTEAFNLAGWNSRTYRTDPELLKDIVGDVFRKLPPRYQNQRKGLVGIEEHCKKIEYLLKIGQSEVKTLGIWGMDGIALIGNIWCSTYEDGIEVSWDRSLSSATIKSVPEAKKKMSIRTNRFKAVDRVLKDLERVEKEGKLNDLKSELNKIKEVFLKVKENEEELLDTCCQLPAAASSGQSSHHAQAALSSGQSSHHVTPLPSSTTPQLHQEEDLQIIKDYCNNLDPYDKRCFSSLILQFPENAVFKRRELIALWFSRYGDYIWPAEKRVDPLLRSKVIVPHGNGKSPIASKFKINPLVRHKSLSPLFQNEEVPICGYYSQIKTSSSSRASDIGYERLVLDQRKIKLSDGFGFKSNRCFYIHNVGASYLNFGPGWMAKMKDLQVLQLGRWTKDSPKHHIEVDSEEFLKELSGHEYFRCLSLRGISRIFELPPSIVKIESLETLDLKACHNLETLPSDISSLQSLWYLNLSECYLLDRMPKGIENLTVLRVLKGFVLGSSSKTPCRISDIAARLKRLERLSIRIGSGAVIQDGEFESLEELSKLEHLKISWGVFDTRYIDIQISVPSSLKKLHLEGFPGQNIPEWLKPSKLPQELELRELHITGGKLESLDHGENNDWGVEMVYLKYLKDLDVDLEHLRKLFPSLRYVEIKQILNQPYLEWSIN* 1659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2522 1658 MobiDBLite consensus disorder prediction 1 20 - -
Gso8g2522 1658 Pfam Leucine Rich Repeat 668 686 IPR011713 -
Gso8g2522 1658 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 161 IPR035897 -
Gso8g2522 1658 Pfam TIR domain 883 1041 IPR000157 GO:0007165
Gso8g2522 1658 Pfam TIR domain 24 191 IPR000157 GO:0007165
Gso8g2522 1658 Gene3D - 875 1035 IPR035897 -
Gso8g2522 1658 SUPERFAMILY L domain-like 1352 1629 - -
Gso8g2522 1658 Gene3D - 18 184 IPR035897 -
Gso8g2522 1658 ProSiteProfiles TIR domain profile. 871 1029 IPR000157 GO:0007165
Gso8g2522 1658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 434 IPR027417 -
Gso8g2522 1658 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 883 1072 - -
Gso8g2522 1658 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 19 786 - -
Gso8g2522 1658 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 789 854 - -
Gso8g2522 1658 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1405 1498 - -
Gso8g2522 1658 Gene3D Ribonuclease Inhibitor 514 754 IPR032675 -
Gso8g2522 1658 Gene3D Ribonuclease Inhibitor 755 855 IPR032675 -
Gso8g2522 1658 Coils Coil 1129 1156 - -
Gso8g2522 1658 SMART till_3 24 158 IPR000157 GO:0007165
Gso8g2522 1658 SMART till_3 878 1003 IPR000157 GO:0007165
Gso8g2522 1658 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 789 854 IPR044974 GO:0006952
Gso8g2522 1658 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 786 IPR044974 GO:0006952
Gso8g2522 1658 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 883 1072 IPR044974 GO:0006952
Gso8g2522 1658 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1405 1498 IPR044974 GO:0006952
Gso8g2522 1658 Gene3D - 185 335 IPR027417 -
Gso8g2522 1658 PRINTS Disease resistance protein signature 218 233 - -
Gso8g2522 1658 PRINTS Disease resistance protein signature 282 296 - -
Gso8g2522 1658 PRINTS Disease resistance protein signature 375 389 - -
Gso8g2522 1658 PRINTS Disease resistance protein signature 686 702 - -
Gso8g2522 1658 SUPERFAMILY L domain-like 613 859 - -
Gso8g2522 1658 MobiDBLite consensus disorder prediction 1176 1204 - -
Gso8g2522 1658 Gene3D Ribonuclease Inhibitor 1347 1654 IPR032675 -
Gso8g2522 1658 Pfam NB-ARC domain 203 421 IPR002182 GO:0043531
Gso8g2522 1658 SUPERFAMILY "Winged helix" DNA-binding domain 411 516 IPR036390 -
Gso8g2522 1658 SUPERFAMILY Toll/Interleukin receptor TIR domain 884 1006 IPR035897 -
Gso8g2522 1658 ProSiteProfiles TIR domain profile. 23 184 IPR000157 GO:0007165
Gso8g2522 1658 Gene3D - 342 424 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2522 Gso-Chr8 42458934 42475684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2522 19 829 WRKY Transcription Factor Family AT4G12020 31.561 3.46e-88 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2522 - - gsj:114424199 3235.28