Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2492 ATGGAAGAAGAATGTGTTCATCAACAAAACGTGGCTGGTAATAAGTCCAATTTCCCGCTACAGCTGCTGAAGAAAAAGGATGAGGGACCACCACCATCACCACCGCCGAGCGCCGCCAAGGCCAAGCGACCACCGACGAAGGACAGACACACCAAGGTGGAGGGGCGGGGGCGGCGGATCCGGATGCCGGCGGCTTGCGCGGCGAGGGTGTTCCAGCTGACGCGCGAGCTCGGCCACAAGTCCGACGGTGAGACCATCGAGTGGCTGCTCCGGGAGGCCGAGCCCGCTGTCATCGCCGCCACTGGCACCGGCACCATCCCGGCGAACTTCACGTCGCTGAACATCTCCCTCCGCAGCTCCGGCTCCTCCCTCTCCTCCCCCTCCCACTACTTCCTCAACCGCCGGAACAATCTTTACAATCACAACAACCACCCCTTAGTCACAACAACACCCATATTTTCTTCTTCTGAATCGTGTTTTAAATCATACCCAAGTTTTAGTTTCGCGGAAGATTCTAAAAGGTCCTCTTTTTCCGACTCCTCTTTCGCGAATAACTATTATTCGCGAAAGAGGAGGCACGAGGTGATTTCGCACGTGGGAAGTTGTTGTTCGTCTCAGATGTGTACGGACTCCGTTCCCGCCATGATGGGTGGCGCTGATTCAGTTTGGGCCATTCCCTCTGTGGCTTCTTCTTCTGCGAGTGGCATTCCTTTTATGAATTTTGCTTCGCTGTTGACCGGTCAACACGTGGGTGGTGCAACGCTGAGTAGTGAAACCAACTTCAATGTGCTTGCAACGCTTAATGCGTATTCCGGCCAACAACATCAACATCGCCATGAAGGAGAAGAAACACACTACTAA 861 0.5436 MEEECVHQQNVAGNKSNFPLQLLKKKDEGPPPSPPPSAAKAKRPPTKDRHTKVEGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLREAEPAVIAATGTGTIPANFTSLNISLRSSGSSLSSPSHYFLNRRNNLYNHNNHPLVTTTPIFSSSESCFKSYPSFSFAEDSKRSSFSDSSFANNYYSRKRRHEVISHVGSCCSSQMCTDSVPAMMGGADSVWAIPSVASSSASGIPFMNFASLLTGQHVGGATLSSETNFNVLATLNAYSGQQHQHRHEGEETHY* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2492 286 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 32 280 IPR005333 GO:0003700
Gso8g2492 286 MobiDBLite consensus disorder prediction 1 59 - -
Gso8g2492 286 PANTHER TRANSCRIPTION FACTOR TCP23 32 280 - -
Gso8g2492 286 Pfam TCP family transcription factor 46 144 IPR017887 -
Gso8g2492 286 MobiDBLite consensus disorder prediction 42 59 - -
Gso8g2492 286 ProSiteProfiles TCP domain profile. 46 100 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2492 Gso-Chr8 42072200 42073426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2492 45 226 TCP Transcription Factor Family AT1G35560 47.783 2.28e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso8g2492 TCP 1.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2492 - - gmx:102664835 520.39