Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2478 ATGAAGAACTTGTGGCTTTGTTTCAGTTACTTGTTTCCTGCAGCAATCATTCTTGTTCTGCTTACTCCTTCCTCAGTTGCACAGCTATCACCAAGTGAGGGTAGAATTCTATTCCAAGTTCAGAAGCTTCTTGAGTACCCTCAAGCCCTTCAAGGGTGGAATAGATGGACCAACTTGTGCTTCCTCCCTTCCTCACCTTCCCTCAAGATAGTTTGCTCCAATGGTCATGTCACGGAACTTACAATCATTGGAAACAAGACCTCTCCATCTTTACACAATCCCAAAGAAAGTGCTTGGACTTCCCTTCAAACACTGTCTGGAAGATTCTCCATTGATTCTTTCTTCACTGTTATGACAAAGCTTTCAAATTTGAAGATGTTGTCCTTGGTGTCTTTGGGTTTGTGGGGTCCTTTACCAGCCAAGATCAACAGGTTTTGGTCCTTGGAAGTGCTGAACATTAGCTCAAATTTCATTTATGGGGGAATTCCACAATCTATATCCTCTATGAGGAATCTAAAGAGTCTTGTTTTAGTTGATAATCTCTTCAATGGAAGTATTCCTGACCTCCAAAGCCTAAGTTCTCTTGAAGAACTCAACTTGGAAGGTAATAATTTGGGTCCTGGATTCCCTTCATTGGGAAAGAATCTTGTTACTATTGTCTTGAGAAATAATTCACTGAGATCTCATATCCCTCCACAGCTTGTGCACTTTGACAAACTGCAGGTATTTGATGTGTCTTCCAACGATTTTTTTGGAAACATCCCATCATTTATAATCTCTTTGCCTTCCCTTCAGTACCTAAACTTGGCCTCAAACCATCTAAGTGGTAACCTATCAGTGAATATGGCATGTAGTTCTTCACTAACATTTGTGGATATCTCACACAACCTTCTGGTTGGAAAATTGCCATCCTGCTTTGGTTCAATGTCTTCAAAGGCCAAAGTGCTATATTCTGGGAACTGTTTGTCAACCAAAAATAGGTTGAATGATCAACAACATCCATTTTCTTTTTGCAAGAGAGAGGGGGCTTTGGCTGTTAAGCCTCCAGCTAAAAACCTGAAGAAGGAATCAAATTTGGGTACAAAACTAGGGCTAATACTTGGAATAATTGTAGGAATTGTAGTAATTGGAGGACTTCTGGTTCTACTCGTTGTGTGCATCATTAGGAAGTCCAAAGCAGAAAGATCACCTCATAAAATGGACAAATCTGTTGCTAATAAATATTCTACCAGTGTATCTCCTAGACCAATTGGTACAAGACATATTCCTCAGGCAATGAAGCAAGCTGCAGTTGGACTGCCACCATACCGTATCTTCACATCAGAGGAAATTGAAGATGCAACTAACAACTTTGACCCATCAAATTTAATAGAAGAGGGATCACAGGGACAGCTATATAAAGGTTGGCTCAGAGATGGTTCAGTGGTCCTTGTTAATTGTGTAAAAATAAAGCAGAAAGGTTTGCCCCACAGCATCATGCAGCAAGTAGAGGTATTACACAATTTGAGGCACAGGCATATGGTGAGTGTTCTAGGACACTGTCTCATTACTGAACAGGAGCATCCACAAACAACAAGCACAGTCTTCATTGTGTTTGAGTACATCTCAAATGTGTCATTGAGGGATCAACTTTCAGATGGGAGGAAGAGGGAAATGCTGAAATGGCCACAAAGAATGGCAATGAGCATAGGCATTGCAAGAGGAGTTCAATTCTTACACACAGGAGTTGCTCCTGGAATATATGGCAACAACTTAAAGATTGAGAACATTCTGTTGGATGATAGTCTCAATGCAAAAGTCAGTAGATACAACATTCCATTACCATCCAAGAGTGCACATAATGAACAAAATGCCACCAATCACATTAGCAGCACAAACAATACAGAAAAGGAAGATATCTATCAGTTGGGTGTTATTCTACTTGAAGTTATCACTGGAAAACAAATTACATCCTCGAGTGAAATAGAGGAGCTGAAGGAAGAGCTGGAGAATGGTTCACCAGAAGCAACATCAGTAATCAGAAGTGCCATTGACCCTACACTGAGGGGAACTTATGCATATGAATCAATGAAGACTGCAGTTCAGATCACCATAAACTGTCTCTCCAAGGTTTCTAGCCAGCGCCCTTCAATAGAGGATGTTCTTTGGAATTTGCAGTATGCAATGCAAGTTCAAGAGTCCTGGACCAGCAGTGGAAACCTCAGCACAAAATTGTAA 2217 0.4064 MKNLWLCFSYLFPAAIILVLLTPSSVAQLSPSEGRILFQVQKLLEYPQALQGWNRWTNLCFLPSSPSLKIVCSNGHVTELTIIGNKTSPSLHNPKESAWTSLQTLSGRFSIDSFFTVMTKLSNLKMLSLVSLGLWGPLPAKINRFWSLEVLNISSNFIYGGIPQSISSMRNLKSLVLVDNLFNGSIPDLQSLSSLEELNLEGNNLGPGFPSLGKNLVTIVLRNNSLRSHIPPQLVHFDKLQVFDVSSNDFFGNIPSFIISLPSLQYLNLASNHLSGNLSVNMACSSSLTFVDISHNLLVGKLPSCFGSMSSKAKVLYSGNCLSTKNRLNDQQHPFSFCKREGALAVKPPAKNLKKESNLGTKLGLILGIIVGIVVIGGLLVLLVVCIIRKSKAERSPHKMDKSVANKYSTSVSPRPIGTRHIPQAMKQAAVGLPPYRIFTSEEIEDATNNFDPSNLIEEGSQGQLYKGWLRDGSVVLVNCVKIKQKGLPHSIMQQVEVLHNLRHRHMVSVLGHCLITEQEHPQTTSTVFIVFEYISNVSLRDQLSDGRKREMLKWPQRMAMSIGIARGVQFLHTGVAPGIYGNNLKIENILLDDSLNAKVSRYNIPLPSKSAHNEQNATNHISSTNNTEKEDIYQLGVILLEVITGKQITSSSEIEELKEELENGSPEATSVIRSAIDPTLRGTYAYESMKTAVQITINCLSKVSSQRPSIEDVLWNLQYAMQVQESWTSSGNLSTKL* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2478 738 Gene3D Ribonuclease Inhibitor 30 212 IPR032675 -
Gso8g2478 738 MobiDBLite consensus disorder prediction 398 419 - -
Gso8g2478 738 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 8 731 - -
Gso8g2478 738 MobiDBLite consensus disorder prediction 403 417 - -
Gso8g2478 738 Gene3D Transferase(Phosphotransferase) domain 1 535 733 - -
Gso8g2478 738 ProSiteProfiles Protein kinase domain profile. 451 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2478 738 PANTHER OS07G0166700 PROTEIN 8 731 IPR045272 GO:0004714|GO:0006468
Gso8g2478 738 Gene3D Ribonuclease Inhibitor 213 338 IPR032675 -
Gso8g2478 738 SUPERFAMILY Protein kinase-like (PK-like) 432 719 IPR011009 -
Gso8g2478 738 SUPERFAMILY L domain-like 30 323 - -
Gso8g2478 738 Pfam Leucine Rich Repeat 147 168 IPR001611 GO:0005515
Gso8g2478 738 Pfam Protein kinase domain 457 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2478 738 Gene3D Phosphorylase Kinase; domain 1 422 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2478 Gso-Chr8 41677270 41681556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2478 25 674 Miscellaneous Gene Families AT2G02780 48.209 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Gso8g2478 Pkinase 5.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2478 - - gmx:100789785 1392.87