Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2469 ATGGGGTTGGGTGGTGCTGAGAATGGAAAAGTAGTGGTGGAGTCTTTGGATGTGTGTAAATCAAAGGGGAGGAAGAAGAAGAAGAAAGAGGATGGGGAAGTTGAAGAGGAAGAAGAGACTGGGTGTTGGTTTAGGTTGAGGTTCATTGGGAGCTGCATTTCTTCAAGATCCAAAGTTGATAGCTCAGTTAGTGGCACCAGCACTAATTATGCTGAAAGTAAATCAACTATTGACACAAGTAGAGATCAACCAACACTCCGAGTAGTCTCTTCGACAACCACTAGTAATGCCGAAAGCAATTCATCCACTTCCAAACTTGAAGAGGAGCTTAAAGTTGCATCCAGGCTGCGAAAATTTGCATTCAATGATCTTAAATTAGCAACAAGAAATTTTCGGCCTGAAAGTCTTCTTGGTGAAGGTGGCTTTGGTTGTGTGTTCAAGGGATGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACGGGGCTTACTGTTGCTGTAAAAACCCTCAACCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAGGTAAATTATCTTGGTGATCTAGTTCATCCACACCTTGTTAAACTTATTGGTTACTGCATTGAAGATGATCAAAGGTTGCTAGTATATGAATTTATGCCACGGGGAAGCCTGGAAAATCACTTGTTTAGGAGGTCCCTGCCTCTTCCATGGTCCATTAGGATGAAAATTGCACTTGGAGCTGCAAAGGGTCTTGCTTTTCTTCATGAGGAAGCTGAACGACCAGTAATATATAGGGATTTCAAAACTTCCAATATACTATTGGATGCAGAATACAATTCTAAGCTCTCAGATTTTGGACTTGCAAAAGATGGTCCAGAGGGTGATAAAACCCATGTGTCTACTCGAGTGATGGGAACCTATGGTTATGCAGCACCAGAATATGTCATGACGGGACATCTTACATCAAGAAGTGATGTGTACAGTTTCGGAGTGGTACTACTTGAGATGTTGACCGGCAGAAGATCGATGGACAAAAACCGGCCCAACGGTGAACACAACCTTGTGGAATGGGCTAGACCACATCTGGGAGAGAGAAGAAGGTTCTACAAGTTGATAGACCCGCGCTTGGAAGGTCACTTTTCCATAAAAGGGGCTCAGAAAGCTGCGCATCTGGCCGCTCACTGCCTTAGCAGAGATCCAAAAGCGCGACCCTTGATGAGCGAAGTTGTGGAAGCTTTAAAGCCTCTGCCAAACCTCAAGGACATGGCTAGTTCGTCTTATTATTTCCAGACAATGCAAGCCGACCGATTTAGCGTGAGTCCAAATACCAGAAACGGGAGAACACAAGGAGCGTTGCTCACCAGAAACGGGCAACAGCAAAGGAGCCTATCAATTCCACATGGCACTCATGCATCTCCATATCACCATCAGTTTCCACAACCATCACCTAAACCCAATGGCAAGGCATAG 1464 0.4495 MGLGGAENGKVVVESLDVCKSKGRKKKKKEDGEVEEEEETGCWFRLRFIGSCISSRSKVDSSVSGTSTNYAESKSTIDTSRDQPTLRVVSSTTTSNAESNSSTSKLEEELKVASRLRKFAFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNYLGDLVHPHLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNSKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYKLIDPRLEGHFSIKGAQKAAHLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFSVSPNTRNGRTQGALLTRNGQQQRSLSIPHGTHASPYHHQFPQPSPKPNGKA* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2469 487 MobiDBLite consensus disorder prediction 57 104 - -
Gso8g2469 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Gso8g2469 487 PANTHER OS01G0588500 PROTEIN-RELATED 62 477 - -
Gso8g2469 487 SUPERFAMILY Protein kinase-like (PK-like) 117 435 IPR011009 -
Gso8g2469 487 ProSitePatterns Protein kinases ATP-binding region signature. 137 169 IPR017441 GO:0005524
Gso8g2469 487 Gene3D Transferase(Phosphotransferase) domain 1 217 433 - -
Gso8g2469 487 CDD STKc_IRAK 137 414 - -
Gso8g2469 487 MobiDBLite consensus disorder prediction 57 103 - -
Gso8g2469 487 ProSiteProfiles Protein kinase domain profile. 131 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2469 487 MobiDBLite consensus disorder prediction 452 487 - -
Gso8g2469 487 Pfam Protein tyrosine and serine/threonine kinase 135 411 IPR001245 GO:0004672|GO:0006468
Gso8g2469 487 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 62 477 - -
Gso8g2469 487 Gene3D Phosphorylase Kinase; domain 1 105 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2469 Gso-Chr8 41545866 41550145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2469 100 411 Glycoside Hydrolase AT3G07070 56.151 5.38e-118 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso8g2469 PK_Tyr_Ser-Thr 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2469 - - gmx:100787127 929.472