Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2461 ATGGGTGCTGGTGAGTACTACAAGATCCTCAAGGTGAACCGCAATGCCACAGATGAAGAACTCAAGAGGGCATATAAGAGATTGGCCATGAAGTGGCACCCAGATAAGAACCATCAACACCACCATGTTACGAAGGAAGAAGCTGAGGCAAAGTTCAAGCAGGTTTCGGAGGCTTATGATGTTCTCAGCGACCCAAAGAAGCGTCAGATCTATGATTTCTATGGCCACTATCCCCTCAACTCCATGAAGGTGAATGAGGAGAATAGTGATGGGGATGTTAATAGGGTCCCCAAGGGGAAGGGGGAGAAAAATGTGGGGGTGGTTGAGAGCAAATTGGTGTGCACCCTTGAGGAGCTTTACAAAGGGTGCAAGAAGAAGTTGAAGATCTCAAGGACTGTTCCTCACGAATTCGGGAAAATGAAGACTGTGGAAGAGGTCTTGAAAATTGACATCAAACCTGGTTGGAAAAGAGGCACAAAAATAACATTTCCTGGAAAAGGCAACCAAGAAGCAGAAAGTAAAACTCCTGATGACCTAATCTTTGTGGTGGATGAAAAACCACATGCTTTTTTCAAAAGGGATGGAAATGATTTGGTTGTCACACAGAAAATCTTACTTGTGGAGGCTCTAGTGGGAAAGACACTCAACTTAACCACCTTGGATGGAAGAGAGCTCACAATTCAAGTCACAGAAGTAGTGAAACCAAAATATGTGCTGGTGGTCCCAAATGAAGGAATGCCAATTTCAAAGGAACCTGGCAAGAAAGGAAACTTGAGAATCAAGTTTGATGTTTTGTTCCCATCAAGGCTTACCTCACAACAGAAGTATGAGCTGAAAAGGATTTTGAGCAACAGTACTGCTGATGACTAA 870 0.4368 MGAGEYYKILKVNRNATDEELKRAYKRLAMKWHPDKNHQHHHVTKEEAEAKFKQVSEAYDVLSDPKKRQIYDFYGHYPLNSMKVNEENSDGDVNRVPKGKGEKNVGVVESKLVCTLEELYKGCKKKLKISRTVPHEFGKMKTVEEVLKIDIKPGWKRGTKITFPGKGNQEAESKTPDDLIFVVDEKPHAFFKRDGNDLVVTQKILLVEALVGKTLNLTTLDGRELTIQVTEVVKPKYVLVVPNEGMPISKEPGKKGNLRIKFDVLFPSRLTSQQKYELKRILSNSTADD* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2461 289 Pfam DnaJ domain 5 72 IPR001623 -
Gso8g2461 289 SUPERFAMILY Chaperone J-domain 5 80 IPR036869 -
Gso8g2461 289 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 284 - -
Gso8g2461 289 ProSiteProfiles dnaJ domain profile. 5 75 IPR001623 -
Gso8g2461 289 CDD DnaJ_C 108 270 - -
Gso8g2461 289 SUPERFAMILY HSP40/DnaJ peptide-binding domain 110 188 IPR008971 GO:0006457|GO:0051082
Gso8g2461 289 CDD DnaJ 5 64 IPR001623 -
Gso8g2461 289 Pfam DnaJ C terminal domain 108 267 IPR002939 -
Gso8g2461 289 SUPERFAMILY HSP40/DnaJ peptide-binding domain 190 275 IPR008971 GO:0006457|GO:0051082
Gso8g2461 289 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Gso8g2461 289 PRINTS DnaJ domain signature 7 25 IPR001623 -
Gso8g2461 289 PRINTS DnaJ domain signature 25 40 IPR001623 -
Gso8g2461 289 PRINTS DnaJ domain signature 47 67 IPR001623 -
Gso8g2461 289 PRINTS DnaJ domain signature 67 86 IPR001623 -
Gso8g2461 289 Gene3D DnaJ domain 2 96 IPR036869 -
Gso8g2461 289 Gene3D - 106 186 - -
Gso8g2461 289 Gene3D - 188 268 - -
Gso8g2461 289 SMART dnaj_3 4 67 IPR001623 -
Gso8g2461 289 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2461 Gso-Chr8 41331169 41333866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2461 6 74 C2H2 Transcription Factor Family AT1G74250 37.681 2.93e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2461 K09510 - gmx:100786068 585.874