Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2447 ATGCCATATAAGTCGCCGCCGGAAAGTGACGTCACGGCACCGACTCCGGGAGCGTTCAGGCTCCGGTGGGACGTGTTCCTGAGCTTCAGGGGCATCGACACGCGCGACACCATCACGAAGGGTCTCTACTCGTCTCTGGAGGCGCGTGGGGTTCGCGTGTTCCTGGACGACGTGGGATTGGAGCGTGGGGAAGAGATAAAGCAGGGGCTCATGGAGGCCATTGATGACTCAGCAGCGTTCATTGTCATCATATCTGAAAGCTACGCTACTTCCCATTGGTGTCTCGAGGAACTCACCAAGATTTGCGACACCGGGAGGCTCGTCTTGCCCGTTTTCTACCGGGTCGACCCGAGTCATGTCCGCGACCAAAAGGGTCCCTTCGAAGCGGGTTTTGTTGAGCATGAACGAAGGTTTGGTAAAAATGAGGTTTCCATGTGGAGGGAAGCATTCAATAAACTTGGTGGAGTTTCAGGTTGGCCTTTTAATGACAGTGAGGAAGATACTCTGATTCGGCTTTTGGTGCAACGGATAATGAAAGAGTTGAGTAATACTCCTTTGGGTGCGCCTAAGTTTGCAGTAGGGCTTGATGAACGCGTTGAGAAGTTGATGAAAGTGTTACAAGTTCAATCCAATGGTGTCAAGGTTTTGGGGTTGTATGGGATGGGTGGGGTTGGTAAGACAACCCTTGCCAAGGCACTTTTCAACAATCTTCTCAATCATTTTGAGCATCGTTGCTTCATTTCAAATGTCAGAGAAGTTTCATCAAAACAAGACGGTTTGGTTTCCCTTCGAACCAAAATCATCGAAGACCTTTTCCCTGAACCAGGGTCTCCCACCATCATCAGTGATCATGTAAAAGCTAGGGAGAATCGAGTTTTGTTGGTCTTGGATGATGTTGATGATGTAAAGCAGCTTGATGCTTTGATTGGTAAAAGGGAATGGTTTTATGATGGAAGCCGTGTGATAATCACCACAAGGGATACAGTTCTAATTAAGAATCATGTGAATGAGTTGTATGAAGTTGAAGAATTGAACTTTGATGAAGCACTAGAGTTGTTCAGTAACCATGCACTGCGAAGAAATAAACCGCCAGAAAATTTTCTGAATCTGTCAAAGAAGATAGTGTCTCTGACTGGAAGAATGCCTTTGGCTCTAGAAGTGTTTGGTTCGTTTTTGTTTGATAAGAGGAGGGTGGAGGAATGGGAGGATGCTGTGGAGAAGTTGAGACAAATTCGCCCTAAGCATCTTCAAGATGTGTTGAAGATAAGTTATGATGCATTAGATGAAGAAGAGAAGTGCATATTCCTTGATATGGCTTGTTTGTTTGTCCAAATGGGAATGAAGCGTGATGATGTGATTGATGTGTTAAGAGGTTGTGGTTTTAGGGGTGAGATAGCTATTACGGTGCTTGTGCAGAAATGCTTAATCAAAATCACCGATGAGGACAATACACTGTGGATGCATGATCAAATTAGAGACATGGGGAGGCAAATTGTTGTAGATGAAAGCATTGTTGATCCTGGTAAGCGTAGTAGACTGTGGGATCGTGCTGAAATCATGTCTGTTTTGAAGGGTCATATGGGAACTAGATGTATTCAAGGAATTGTGCTAGATTTTGAAGAAGAAAGATTTTATAGAAGCAAGGCCGAATCAGGTTTTTCGACGAACCTTCAATGGAGATCAAGTTTAAGAAATGTATTAGGAGGCATCATCGAACAATGCCTATGCCTTAAGAATTATCTCCACCCTCAAGCAGAGGAAAACAAAGAGGTTATACTTCATACAAAATCCTTTGAACCAATGGTTAATCTGAGACAACTTCAGATTAATAATCGGAGATTAGAAGGCAAGTTTCTTCCAGCTGAACTGAAGTGGCTACAATGGCAAGGGTGCCCTTTAAAACACATGCCTTTGAAATCTTGGCCACGAGAGTTGGCTGTTCTTGATCTCAAAAACAGCAAGAAAATAGAAACCTTGTGGGGATGGAATGATTACAAGGTGCCGCGAAACTTAATGGTCTTGAATCTCTCCTACTGCATCGAACTCACTGCTATCCCTGATTTATCTGGGTGTCGACATCTAGAAAAGATTGATCTAGAGAACTGCATTAATCTAACTAATATTCATGACTCAATTGGCAGTTTGAGTACCTTGCGTAGTTTAAAACTGACGCGCTGTTCAAGCCTTATCAACCTTCCCATTGATGTCTCAGGGCTAAAACATCTAGAGAGCCTTTTTCTTTCTGGCTGCACCAAGTTAAAATCATTACCAGAAAACATAGGAATCCTGAAATCCTTGAAAGCACTTCATGCTGATGGCACAGCTATAACAGAGTTGCCCCGGTCCATTTTTCGCCTCACGAAACTTGAACGACTTGTTTTAGAAGGTTGCAAACATTTGAGAAGGCTACCTAGTTCTATAGGACATCTATGTTCTTTGAAAGAATTATCTCTATATCAGTCTGGATTAGAAGAATTACCTGACTCTATTGGATCATTGAATAACCTTGAGAGACTCAATTTGATGTGGTGTGAATCTCTCACTGTAATTCCTGATTCTATAGGCAGTCTCATATCATTGACACAACTTTTTTTTAATAGCACTAAAATTAAAGAACTCCCTTCTACCATTGGTTCTTTATATTACCTGAGGGAGTTATCAGTTGGGAACTGTAAATTTCTCAGTAAATTGCCAAATTCAATTAAAACTTTGGCTTCAGTTGTTGAGCTTCAGTTAGATGGAACAACCATCACAGATTTGCCAGATGAGATTGGAGAGATGAAATTATTGAGGAAACTTGAGATGATGAATTGCAAAAATCTTGAATATTTACCAGAATCTATTGGCCACCTAGCATTTCTTACTACACTGAACATGGTCAATGGAAATATCAGGAAATTGCCAGAGTCCATTGGATGGCTAGAAAATCTTGTCACCTTAAGATTGAACAAATGTAAAATGCTCAGCAAGCTTCCAGCTTCTATAGGAAATTTGAAATCTCTGTATCACTTCTTCATGGAGGAAACTTGTGTGGCAAGCTTACCTGAAAGCTTTGGGATGCTCTCAAGCTTAAGAACATTGAGAATTGCAAAGAGGCCTAATTTAAATACCAATGAAAATAGCTTCCTTGCAGAACCTGAAGAGAACCACAACTCTTTTGTACTTACACCTTCCTTTTGCAATCTGACCTTGCTAACTGAGCTTGATGCTCGTTCCTGGAGAATATCCGGGAAAATTCCAGATGAATTTGAGAAGTTATCACAATTAGAGACTTTAAAATTGGGCATGAATGATTTTCAAAAACTTCCTTCCAGCTTGAAGGGCCTTTCTATTCTCAAGGTGCTTTCACTTCCAAACTGCACTCAGCTGATCTCTCTCCCCTCACTTCCTTCAAGCTTGATTGAGCTGAATGTTGAAAACTGTTATGCACTAGAAACTATACATGACATGTCAAATTTAGAAAGTCTGAAGGAGTTGAAACTCACAAACTGTGTAAAAGTGAGGGATATACCTGGTCTTGAAGGCTTGAAGTCCTTGAGAAGGTTGTACCTGAGTGGTTGTGTTGCATGCTCCTCACAAATACGCAAGAGACTTTCAAAGGTAGTATTGAAGAATTTACAGAACTTGAGCATGCCAGGAGGCAAATTACCTGAATGGTTTTCAGGACAAACTGTATGCTTTTCCAAGCCTAAAAATCTTGAGCTAAAAGGTGTAATTGTTGGTGTTGTTCTTTCAATCAACCATAATATTAACATTGGCATACCTAATATGCAGCGAGAGCATATGCCTGGAGTGCTTGATGTTCAAGCAAATGTCCTCAAACAGGGCAAAACTCTCTTTAGTACAGTTTTAAATATCTGTGGGGTGCCAAGGACAGATGAAGAACACATACACTTGTGTAGGTTCCATGATTACCATCAGTTGATAGCCATTTTAAAAGATGGTGATACATTTTGTGTGAGTAAGAGAAATCCACCTTTTGATAAAGGGTTGGAGTTAAAACAATGCGGGGTTCATTTAATCTTTGAAGGGGATGATGATTATGATGGAGGGGAAGAATCATTGGACAAAGACCTACAATCTGTCTCAGAAAAATTAGCCAACTTTTTCAAGACTTATGAAGATGAGAGTGTCAGGAATCAGAATGAATTGGAGATGATGGGACAAGAGCCAAGATCTTTTCTTGTTACACTTAGAAGCAATTTTATTTTTCTTTTCCTGATTGGTCTATTCTTTTCTTTGTGCTATATATATGTGTTGGTGTTGCTTAGAAGAGATCGATACATATAG 4290 0.4086 MPYKSPPESDVTAPTPGAFRLRWDVFLSFRGIDTRDTITKGLYSSLEARGVRVFLDDVGLERGEEIKQGLMEAIDDSAAFIVIISESYATSHWCLEELTKICDTGRLVLPVFYRVDPSHVRDQKGPFEAGFVEHERRFGKNEVSMWREAFNKLGGVSGWPFNDSEEDTLIRLLVQRIMKELSNTPLGAPKFAVGLDERVEKLMKVLQVQSNGVKVLGLYGMGGVGKTTLAKALFNNLLNHFEHRCFISNVREVSSKQDGLVSLRTKIIEDLFPEPGSPTIISDHVKARENRVLLVLDDVDDVKQLDALIGKREWFYDGSRVIITTRDTVLIKNHVNELYEVEELNFDEALELFSNHALRRNKPPENFLNLSKKIVSLTGRMPLALEVFGSFLFDKRRVEEWEDAVEKLRQIRPKHLQDVLKISYDALDEEEKCIFLDMACLFVQMGMKRDDVIDVLRGCGFRGEIAITVLVQKCLIKITDEDNTLWMHDQIRDMGRQIVVDESIVDPGKRSRLWDRAEIMSVLKGHMGTRCIQGIVLDFEEERFYRSKAESGFSTNLQWRSSLRNVLGGIIEQCLCLKNYLHPQAEENKEVILHTKSFEPMVNLRQLQINNRRLEGKFLPAELKWLQWQGCPLKHMPLKSWPRELAVLDLKNSKKIETLWGWNDYKVPRNLMVLNLSYCIELTAIPDLSGCRHLEKIDLENCINLTNIHDSIGSLSTLRSLKLTRCSSLINLPIDVSGLKHLESLFLSGCTKLKSLPENIGILKSLKALHADGTAITELPRSIFRLTKLERLVLEGCKHLRRLPSSIGHLCSLKELSLYQSGLEELPDSIGSLNNLERLNLMWCESLTVIPDSIGSLISLTQLFFNSTKIKELPSTIGSLYYLRELSVGNCKFLSKLPNSIKTLASVVELQLDGTTITDLPDEIGEMKLLRKLEMMNCKNLEYLPESIGHLAFLTTLNMVNGNIRKLPESIGWLENLVTLRLNKCKMLSKLPASIGNLKSLYHFFMEETCVASLPESFGMLSSLRTLRIAKRPNLNTNENSFLAEPEENHNSFVLTPSFCNLTLLTELDARSWRISGKIPDEFEKLSQLETLKLGMNDFQKLPSSLKGLSILKVLSLPNCTQLISLPSLPSSLIELNVENCYALETIHDMSNLESLKELKLTNCVKVRDIPGLEGLKSLRRLYLSGCVACSSQIRKRLSKVVLKNLQNLSMPGGKLPEWFSGQTVCFSKPKNLELKGVIVGVVLSINHNINIGIPNMQREHMPGVLDVQANVLKQGKTLFSTVLNICGVPRTDEEHIHLCRFHDYHQLIAILKDGDTFCVSKRNPPFDKGLELKQCGVHLIFEGDDDYDGGEESLDKDLQSVSEKLANFFKTYEDESVRNQNELEMMGQEPRSFLVTLRSNFIFLFLIGLFFSLCYIYVLVLLRRDRYI* 1430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2447 1429 Pfam NB-ARC domain 197 424 IPR002182 GO:0043531
Gso8g2447 1429 PRINTS Disease resistance protein signature 215 230 - -
Gso8g2447 1429 PRINTS Disease resistance protein signature 286 300 - -
Gso8g2447 1429 PRINTS Disease resistance protein signature 378 392 - -
Gso8g2447 1429 PRINTS Disease resistance protein signature 713 729 - -
Gso8g2447 1429 SMART till_3 22 156 IPR000157 GO:0007165
Gso8g2447 1429 Gene3D Ribonuclease Inhibitor 799 939 IPR032675 -
Gso8g2447 1429 Gene3D - 182 342 IPR027417 -
Gso8g2447 1429 SUPERFAMILY L domain-like 486 921 - -
Gso8g2447 1429 PANTHER TMV RESISTANCE PROTEIN N-LIKE 20 1331 - -
Gso8g2447 1429 SUPERFAMILY L domain-like 895 1217 - -
Gso8g2447 1429 Gene3D - 343 428 IPR042197 -
Gso8g2447 1429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 437 IPR027417 -
Gso8g2447 1429 Pfam TIR domain 23 185 IPR000157 GO:0007165
Gso8g2447 1429 ProSiteProfiles TIR domain profile. 21 181 IPR000157 GO:0007165
Gso8g2447 1429 SMART LRR_CC_2 833 863 IPR006553 -
Gso8g2447 1429 SMART LRR_CC_2 1153 1182 IPR006553 -
Gso8g2447 1429 SMART LRR_CC_2 880 907 IPR006553 -
Gso8g2447 1429 SMART LRR_CC_2 691 718 IPR006553 -
Gso8g2447 1429 Gene3D Ribonuclease Inhibitor 564 798 IPR032675 -
Gso8g2447 1429 SMART LRR_typ_2 904 927 IPR003591 -
Gso8g2447 1429 SMART LRR_typ_2 763 786 IPR003591 -
Gso8g2447 1429 SMART LRR_typ_2 1086 1108 IPR003591 -
Gso8g2447 1429 SMART LRR_typ_2 739 761 IPR003591 -
Gso8g2447 1429 SMART LRR_typ_2 810 833 IPR003591 -
Gso8g2447 1429 SMART LRR_typ_2 857 880 IPR003591 -
Gso8g2447 1429 SMART LRR_typ_2 951 974 IPR003591 -
Gso8g2447 1429 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 1331 IPR044974 GO:0006952
Gso8g2447 1429 Gene3D Ribonuclease Inhibitor 940 1043 IPR032675 -
Gso8g2447 1429 Gene3D Ribonuclease Inhibitor 1048 1257 IPR032675 -
Gso8g2447 1429 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 158 IPR035897 -
Gso8g2447 1429 Gene3D - 20 181 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2447 Gso-Chr8 41155204 41161509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2447 23 886 WRKY Transcription Factor Family AT4G12020 29.888 2.77e-82 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2447 - - gmx:100786934 2791.14