Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2444 ATGTGTTCCGCAGAGAAGGACGGGATCATGCTCTTCGGCGTGCGCCTCTCCGTCGTGGATAACCACCCCACCTCCTTCAGAAAGAGCGCTAGCATGACCAACCTTTCTCAGTACGAGTCTCCACCACCGCACGATCCCAACGCAGGGTATGCCTCAGACGACGTCGTTCACCCCTCCCGTCACACCCGCGAACGCAAGCGAGGGGTTCCGTGGACGGAGGAAGAGCACAGGTTGTTCCTGCTGGGATTACAGAACATCGGTAAAGGAGATTGGAGAGGGATTTCTAGAAACTTCGTGAAGACTCGTACGCCTACACAGGTTGCTAGTCATGCTCAGAAGTACTTCCTCCGCCGTCACACCCAGAACCGCCGCCGCCGGAGATCTAGTCTCTTTGATATCACCACCGACTCGGTGATGGAACCGTGGCCGGAGAAGGAAGAGGAACAAGTGGTGTTGCCGTCAGCTAGGTCGAAACCGGTTCTGCCGGTGCCTCCGTCGTCGAAGATGGCTGAGTTGGACTTGAGTGGGAAGTCGCTGTCGCTGAAGCTTCCGGTATCCAAGCCACCTATTTCTAAAGAGAATTTTGGCGGGATACCATTATCGGTGTTGCTTGAAGGTTAA 621 0.5539 MCSAEKDGIMLFGVRLSVVDNHPTSFRKSASMTNLSQYESPPPHDPNAGYASDDVVHPSRHTRERKRGVPWTEEEHRLFLLGLQNIGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHTQNRRRRRSSLFDITTDSVMEPWPEKEEEQVVLPSARSKPVLPVPPSSKMAELDLSGKSLSLKLPVSKPPISKENFGGIPLSVLLEG* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2444 206 CDD SANT 70 115 IPR001005 -
Gso8g2444 206 MobiDBLite consensus disorder prediction 30 68 - -
Gso8g2444 206 ProSiteProfiles Myb-like domain profile. 63 115 IPR001005 -
Gso8g2444 206 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 66 117 IPR006447 GO:0003677
Gso8g2444 206 SMART sant 67 117 IPR001005 -
Gso8g2444 206 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE 7 186 - -
Gso8g2444 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 119 IPR017930 -
Gso8g2444 206 Gene3D - 69 120 - -
Gso8g2444 206 Pfam Myb-like DNA-binding domain 70 115 IPR001005 -
Gso8g2444 206 ProSiteProfiles SANT domain profile. 66 119 IPR017884 -
Gso8g2444 206 PANTHER TRANSCRIPTION FACTOR KUA1 7 186 - -
Gso8g2444 206 SUPERFAMILY Homeodomain-like 65 118 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2444 Gso-Chr8 41130141 41131490 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso8g2444 Myb_DNA-binding 1.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2444 - - gmx:778091 387.882