Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2436 ATGGCTTTGAATACGATGATACTTCAATCATGGCCTTTTATGAGCCTTGTTTTTGTTTTACTTTTGCACAGTTTGTCAATAACACCAACCTGTCATTGCCAAACCAGCACCAATTCTCCTACTCAAAACATTGAAACTTTCTATCCAAATGGAACTTCAGCCACAGCTCCAGCAACACAACAACCACCACCACCAGTACCAACCGGTAACATAGCGCCTAGCCGCGGTTCATCGAACCGTAACATAGCCACGGCAGTGGCTGCGACTGCAGCTAGCACCATAGTTGTTTGTGGTTTAATTTTCTTTGTGGTTCAAAGGTGCTTGAGGAAGAGAAGGAGAAGGAGAGAGGAGATAAGAAGTAACACTGCTGGTGGTGGTGGTGGTGGTGGAGATACCCGAGTTGTGCCTCAGGGAAATTTGTTTGAGAGAATTGATGGGAATGTGAGAGGGTTGATTGTTGATGAGGATGGTTTGGATGTGATTTATTGGAGAAAGCTTGAAGGGAAGAACTCTAACAAGGATCTTCTGCATAAGGAGGTTGTGAGGAGTTCTAGAAACAACGAAAAAGAAGATGAAAAACATGGTCATGATGAAAATCAAGTGAAGAAATCAAAGTATATCCAAGAGGTTCCTCTTCTTAGAGGGAAATCTTCAACTTCTCACTTGAATGTATCTCCAGAAGAGGATGAGCCTTATAGATTTTCGCCACTTCCTTCTCCTCCTCCTTCTGCTTCTGTTTCTGCTCCTAATTCTTCCAGTGTTCCTGCATCAGTCGGAATTGTTATCAAGGGTGCTCAGAAACCAGATTCTCCAACTCAACCATCAACTCCACCTCCTCCAGTTTCACCATCAACACCATCATCCTCTACTTCTTTTGCAGCGGTTCCAAAAACGAATATTCCTGCTCCGTCGCCTCCCCCTCCTCCGATCCCAGCTAGAAGGAATCCAACACCTCCTCCTCCTCCGCCATCGTCAAAGCCACCGCCTGCTCCCATTGAAATGCAAGCTATTAAGCAAAGAAACTCTTCAGGAAAAGGCATGCTGGAAACTAGCAATGATCAAGTGAAACTGAAGCCTTTGCATTGGGATAAGGTGAATACTAATAATGCTGATCACTCCATGGTTTGGGATAAAGTTGATCGCGGCTCTTTCAGAGTTGATCAAGATCTTATGGAAGCTCTCTTCGGTTATGTTGCGACCAACCGAAGATCTCCCAAAGGAAAGAGTCACTCAGCCATTCCTAGCAAGGATGCTTCAGCTCAATCAGCAAAAACTAATTTCCTTCTTGACCCTAGAAAATCACAGAACATTGCTATTGTTTTGAAATCTCTTGCAGTCTCACAAGGCGAAATTCTCGATGCACTCACTGACGGTAAGGGCCTCAATGCAGATACCCTTGAAAAGCTTGCTAGAGTTTCCCCAACAGAAGAAGAGCAATCTCTTATCCTTCAATACAAAGGAGATCCAGCAAGACTTGCAGCAGCTGAATCATTCCTCTTTAGCATCCTTAAAGCTGTTCCGTCGGCTTTCAAGCACTTGAATGCCATGCTATTCAGGTTGAATTATAACTCGGAGATTCAAGAAATCAAGGAATCTCTGCAGACCATTGAACTGGGGTGTAACGAGCTTAAAAGCAAAGGACTCTTTTTGAAGCTTCTTGAAGCAGTTCTTAAGGCAGGAAATCGAATGAATGCAGGAACTGCAAGAGGTAATGCTCAAGCTTTCAATTTGGCTTCTCTAAGGAAGCTCTCTGATGTCAAGAGCACCAACGGAAGAACGACATTACTTCACTTTGTGGTTGAAGAGGTAGTCCGTTTGGAGGGAAAACGGGTTGCTCTTAACCGCAATGGCAGCCTGAGCAGTAGCAGCAGTAGGAGCAGCAGCAACAGCAATGGAAACTATGAGAACAACATTGCTTCAAATGAACTGGTAGAAAGGGAATATGTAACACTAGGATTGCCAATTGTAGGAGGGATCAGTTCTGAGTTATCCAATGTTAAGAAAGCAGCACAAATAGATCATAACAACTTAGTTGGTTCAATCTCAGCCCTCTCAACCCAGTTAGTTGAAATTCAACAACTTGTTTCCTCGTGTGGAAATGGTGAAGGAGGAAATTTTGTGAAAGAAATGGATCATTTTCTTGGAAATGCTGAGGAAGAGTTGAAATTAGTGAGGGAGAAGCAAACAAGTGTGTTTCAGCTTATCAAGAAAACAGCACAGTACTATCAAGGAGGATCTTCAAAAGAGACTGCAGAAAACAATCTTCAATTGTTTGTCATAGTGAAGGATTTTCTGGGAATGGTTGATCAAACTTGCATTGAGATTGCACGTGACATGCAGAAGAGGAAGCCTCCCAAGGCACTTTTTAGATAG 2373 0.4328 MALNTMILQSWPFMSLVFVLLLHSLSITPTCHCQTSTNSPTQNIETFYPNGTSATAPATQQPPPPVPTGNIAPSRGSSNRNIATAVAATAASTIVVCGLIFFVVQRCLRKRRRRREEIRSNTAGGGGGGGDTRVVPQGNLFERIDGNVRGLIVDEDGLDVIYWRKLEGKNSNKDLLHKEVVRSSRNNEKEDEKHGHDENQVKKSKYIQEVPLLRGKSSTSHLNVSPEEDEPYRFSPLPSPPPSASVSAPNSSSVPASVGIVIKGAQKPDSPTQPSTPPPPVSPSTPSSSTSFAAVPKTNIPAPSPPPPPIPARRNPTPPPPPPSSKPPPAPIEMQAIKQRNSSGKGMLETSNDQVKLKPLHWDKVNTNNADHSMVWDKVDRGSFRVDQDLMEALFGYVATNRRSPKGKSHSAIPSKDASAQSAKTNFLLDPRKSQNIAIVLKSLAVSQGEILDALTDGKGLNADTLEKLARVSPTEEEQSLILQYKGDPARLAAAESFLFSILKAVPSAFKHLNAMLFRLNYNSEIQEIKESLQTIELGCNELKSKGLFLKLLEAVLKAGNRMNAGTARGNAQAFNLASLRKLSDVKSTNGRTTLLHFVVEEVVRLEGKRVALNRNGSLSSSSSRSSSNSNGNYENNIASNELVEREYVTLGLPIVGGISSELSNVKKAAQIDHNNLVGSISALSTQLVEIQQLVSSCGNGEGGNFVKEMDHFLGNAEEELKLVREKQTSVFQLIKKTAQYYQGGSSKETAENNLQLFVIVKDFLGMVDQTCIEIARDMQKRKPPKALFR* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2436 790 Pfam Formin Homology 2 Domain 350 768 IPR015425 -
Gso8g2436 790 PANTHER FORMIN-LIKE PROTEIN 1 788 - -
Gso8g2436 790 PANTHER FORMIN-RELATED 1 788 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso8g2436 790 MobiDBLite consensus disorder prediction 177 204 - -
Gso8g2436 790 MobiDBLite consensus disorder prediction 177 332 - -
Gso8g2436 790 MobiDBLite consensus disorder prediction 49 76 - -
Gso8g2436 790 MobiDBLite consensus disorder prediction 271 285 - -
Gso8g2436 790 SMART it6_source 347 783 IPR015425 -
Gso8g2436 790 Coils Coil 526 546 - -
Gso8g2436 790 MobiDBLite consensus disorder prediction 299 330 - -
Gso8g2436 790 Gene3D Formin, FH2 domain 367 787 IPR042201 -
Gso8g2436 790 SUPERFAMILY Formin homology 2 domain (FH2 domain) 360 782 - -
Gso8g2436 790 ProSiteProfiles Formin homology-2 (FH2) domain profile. 347 790 IPR015425 -
Gso8g2436 790 MobiDBLite consensus disorder prediction 113 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2436 Gso-Chr8 40972985 40976342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2436 3 783 FH2 protein (formin) Gene Family AT1G70140 44.106 0.0 581