Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2404 ATGAGGGAAGATAGGATTGAAGAGATCAGCACAAGGTTGTTGTTGGGTAGAAGCAGCAGTGGTGGGAGCAGTGAGTCAAGGTGGGTTGATGGAAGTGAAGTGGACTGGGATGAGGTTCCTATGTGGTCAAAGCATGATGATGGCAGAGAAGGGTATGGCTCAATCAGGAGGAGGCTTACCAAGAAGCCCAAGAGGGTTGACTCATTTGATGTTGAAGCCATGGAGATTGCTGGAACTCATGCTCATCACTCCAAGGACCTTTCCCTCTGGCCCACTATTGCATTGGCATTTAAGACTCTTGGTGTGGTATATGGTGACATGGGAACAAGTCCTCTATATGTTTTTGCTGATGTCTTCAGCAAGGTTCCAATTGGATCAGATGATGATATCTTGGGGGCATTATCATTAGTAATGTATACAATAGCACTTATTCCATTAGCGAAATATGTTTTTATAGTCCTCAAAGCAAATGACAGTGGAGAAGGAGGAACGTTTGCACTATACTCGCTGATTTGCAGGTATGCAAATGTGAGTCTGCTTCCAAATCGTCAACAAGCCGATGAACAAATCTCTAGTTTTAAGCTCAAACTGCCTACTCCAGAACTGGAAAGGGCCTTAAGAATAAAGGACACTTTAGAAAGGACACCATTTTTGAAGAACCTATTATTGGTGTTGGTTCTTCTGGGAGCTTCCATGGTTATTGGAGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCCATAAGTGGTCTGCAGGATCAAATAGATGAATTTGGTACTGGTGAAGTGGTTGGTATTTCTATTGTAGTCCTGGTGGCTTTGTTCAGCATACAACGGTTTGGTACCAGTAAAGTCGGTTTCATGTTTGCCCCTATACTTGCCTTATGGTTCTTTTCTCTGGGTGCTATTGGAATATACAATATACTTAAATATGATATCACTGTTCTAAGAGCATTCAATCCGGCTTATATTTATTATTTCTTCAAGAACAATGGCAAGGATGCATGGTCAGCTCTTGGTGGTTGTGTTCTGTGCATTACAGGTGCAGAAGCAATGTTTGCAGATCTGGGTCATTTTTCTGTACCAGCAATACAGATTGCCTTCACTTGTGTGGTATTTCCCTGTCTCCTCCTTGCTTATATGGGCCAAGCTGCTTTTTTGACGAAGAACCCAAATTATTATGCAAGTGTATTCTACAAGTCTGTTCCAGAGAGTCTCTTCTGGCCAATGTTTGTGATTGCCACACTTGCTGCAATGATTGCCAGCCAAGCAATGATATCTGCTACATTTTCATGCATAAAGCAATCTATGGCTTTGGGATGCTTCCCCAGGCTCAAGATAATTCACACCTCAAAAAGGTTCATTGGCCAAATTTACATCCCCATAATTAACTGGTTTCTGATGATCATGTGCATAGTTGTGGTTTCCATCTTCCAAAGCACAACTGATATTGCAAATGCATATGGCATTGCTGAAGTTGGTGTCATGATGGTTAGCACCACCTTGGTGACCCTTGTGATGGTTTTAATTTGGCAGACCAACTTATTTTTGGCATTTTCTTTTGCTCTTGTATTTGGTACAGTGGAGTTAATTTACCTGTCTTCTGTGCTATCCAAAATCATTGAGGGTGGCTGGCTTCCACTTGCCTTTGCTACCTTTTTCCTCTCTGTGATGTACACATGGAACTATGGGAGCGTATTGAAGTACCGAAGTGAAGTTAGAGAGAAGGTTTCAGTGGACTCAATGCTTGAGCTTGGCTCCAATCTTGGAACAGTAAGGGTGCCAGGAATAGGATTGCTATATAATGAACTTGTCCAGGGCATTCCCTCCATTTTCTTGCAGTTCCTGCTCAACCTTCCAGCTCTTCACTCTACTATAGTTTTTGTCTGCATTAAATATGTTCCAGTCCCTGTGGTTCCTCAAGAGGAAAGATTTCTATTTCGACGAGTTTGCCCCAAAGATTACCACATATTCCGCTGTGTCGCCCGATATGGCTACAAAGATGTAAGGAAGGAAGATCACCATGCATTTGAACAGCTTCTTATTGAGAGTCTTGAGAAATTCTTGAGAAGGGAAGCTCTAGAAACAGCCTTGGAGTTGGAGGGCAACTTAAGTGATGAAATGGACAGTGTCTCAGTGAATACAAGAGTTTCAGATGTTCCTGTTGATACTGCGGCTGAGGAGCTTAGGATTCCACTGGTGCATGATCAGAAATTGGAAGAAGCAGGAGCTTCTTCTGCCTCTCAGGAAGTTGCATCAGCATTGCCATCTAGTTACATGTCATCAGATGAAGATCCTGCTCTTGAATATGAGCTTTCAGCCCTTAGAGAAGCATTGGAATCAGGATTCACCTATTTGCTTGGACATGGGGATGTGAGGGCAAAGAAGAACTCTTTTTTCTTTAAGAAATTGATGATAAATTATTTCTATGCATTCCTCAGAAAGAACTGCAGAGGAGGTACAGCAAACATGAGAGTACCTCATACCAATATCATCCAAGTTGGGATGACATATATGGTTTGA 2526 0.4224 MREDRIEEISTRLLLGRSSSGGSSESRWVDGSEVDWDEVPMWSKHDDGREGYGSIRRRLTKKPKRVDSFDVEAMEIAGTHAHHSKDLSLWPTIALAFKTLGVVYGDMGTSPLYVFADVFSKVPIGSDDDILGALSLVMYTIALIPLAKYVFIVLKANDSGEGGTFALYSLICRYANVSLLPNRQQADEQISSFKLKLPTPELERALRIKDTLERTPFLKNLLLVLVLLGASMVIGDGILTPAISVMSAISGLQDQIDEFGTGEVVGISIVVLVALFSIQRFGTSKVGFMFAPILALWFFSLGAIGIYNILKYDITVLRAFNPAYIYYFFKNNGKDAWSALGGCVLCITGAEAMFADLGHFSVPAIQIAFTCVVFPCLLLAYMGQAAFLTKNPNYYASVFYKSVPESLFWPMFVIATLAAMIASQAMISATFSCIKQSMALGCFPRLKIIHTSKRFIGQIYIPIINWFLMIMCIVVVSIFQSTTDIANAYGIAEVGVMMVSTTLVTLVMVLIWQTNLFLAFSFALVFGTVELIYLSSVLSKIIEGGWLPLAFATFFLSVMYTWNYGSVLKYRSEVREKVSVDSMLELGSNLGTVRVPGIGLLYNELVQGIPSIFLQFLLNLPALHSTIVFVCIKYVPVPVVPQEERFLFRRVCPKDYHIFRCVARYGYKDVRKEDHHAFEQLLIESLEKFLRREALETALELEGNLSDEMDSVSVNTRVSDVPVDTAAEELRIPLVHDQKLEEAGASSASQEVASALPSSYMSSDEDPALEYELSALREALESGFTYLLGHGDVRAKKNSFFFKKLMINYFYAFLRKNCRGGTANMRVPHTNIIQVGMTYMV* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2404 841 Pfam K+ potassium transporter 96 669 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso8g2404 841 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 8 841 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso8g2404 841 PANTHER POTASSIUM TRANSPORTER 12-RELATED 8 841 - -
Gso8g2404 841 TIGRFAM kup: potassium uptake protein 95 841 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2404 Gso-Chr8 40346379 40353612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2404 4 841 Inorganic Solute Cotransporters AT1G60160 74.316 0.0 1247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2404 K03549 - gmx:100814419 1600.88