Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2399 ATGGCTTCTTCACTCAGAATCTCAAGACTTATCTCTCGCTCCTTTTCTTCTACTTCTTTCTTTTCACGAGGTGGGAATGGTTTCCTTGGTTCAAGACAAAGTAAATTCAGCACTTCTGCTGCCATTGAAGAAGAACCCATTAAACCATCAATACAAGTAGAACACACCCAACTCTTAATTGATGGAAAATTTGTAGATGCTGCTTCTGGTAAAACTTTTCCAACTTTAGATCCTAGGACAGGTGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATGTTGATCGAGCAGTTTCAGCTGCACGAAAAGCATTTGATCATGGACCATGGCCTAAGATGACAGCTTATGAACGGCAAAGGATCTTGTTGCGTGTGGCCGATCTGATCGAGAAGCATAATGATGAGCTTGCAGCACTTGAGACTTGGGATAATGGAAAGCCTTATGAACAAGCTGCTAAGATTGAAGTTCCAATGCTTGTTCGCCTGATTCGATACTATGCTGGTTGGGCAGATAAGATTCATGGTCTAACAGTTCCAGCTGATGGACCTTATCATGTGCAAACATTGCACGAACCGATTGGTGTTGCCGGTCAGATCATTCCATGGAACTTCCCTCTTCTCATGTTTGCCTGGAAGGTTGGACCGGCATTGGCCTGTGGCAACACCATTGTTCTCAAAACAGCTGAGCAGACACCATTATCTGCTTTATATGCAGCAAAACTATTTCATGAGGCTGGACTTCCTGCTGGTGTTTTGAATGTAGTTTCCGGCTTTGGTCCAACTGCTGGTGCTGCTCTTGCTAGTCACATGGAGGTTGATAAGCTTGCTTTTACCGGTTCCACTGATACTGGGAAAGTTGTCCTTGAACTGGCGGCTAAAAGCAATCTTAAGCCTGTTACTTTGGAGCTTGGTGGGAAATCTCCCTTTATAGTGTGTGAAGACGCTGATGTAGATCAGGCTGTTGAGCTCGCACACTTTGCCTTATTCTTTAATCAGGGACAATGTTGCTGTGCTGGGTCTCGAACATTTGTACATGAAAATGTATACGAGGAGTTTGTTCAGAAAGCAAAGGCTCGTGCTTTGAGACGTGTTGTTGGTGATCCATTCAAGGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGACCAATTTGAGAAAATACTGAGGTACATCAGATCCGGTGTTGAAAGCGGGGCAACCCTTGAAACAGGAGGAGACAAGCTTGGCAACAAGGGCTTCTACATTCAACCTACAGTCTTCTCAAATGTTAAGGATGGCATGCTGATTGCAAAGGATGAGATCTTTGGTCCAGTCCAATCCATATTAAAATTCAAGGACCTTGGTGAGGTAGTTCAAAGAGCGAACAACACACGTTACGGGCTTGCGGCAGGAGTGTTCACAAAGAACATGGACACTGCAAACACTTTGACGCGGGCACTGAGAGTTGGAACAGTTTGGATAAACTGCTTTGACACATTTGATGCTGCAATTCCCTTTGGAGGGTACAAAATGAGTGGTCAAGGCAGAGAAAAAGGAGAGTATAGTCTCAAAAACTACTTGCAAGTGAAGGCTGTTGTTAATCCCTTGAAGAACCCAGCATGGCTTTGA 1611 0.4451 MASSLRISRLISRSFSSTSFFSRGGNGFLGSRQSKFSTSAAIEEEPIKPSIQVEHTQLLIDGKFVDAASGKTFPTLDPRTGEVIAHVAEGHSEDVDRAVSAARKAFDHGPWPKMTAYERQRILLRVADLIEKHNDELAALETWDNGKPYEQAAKIEVPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASHMEVDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHENVYEEFVQKAKARALRRVVGDPFKGGIEQGPQIDSDQFEKILRYIRSGVESGATLETGGDKLGNKGFYIQPTVFSNVKDGMLIAKDEIFGPVQSILKFKDLGEVVQRANNTRYGLAAGVFTKNMDTANTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVNPLKNPAWL* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2399 536 Pfam Aldehyde dehydrogenase family 64 526 IPR015590 GO:0016491
Gso8g2399 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 60 524 IPR016162 GO:0016491
Gso8g2399 536 SUPERFAMILY ALDH-like 51 529 IPR016161 GO:0016491
Gso8g2399 536 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 25 536 - -
Gso8g2399 536 CDD ALDH_F2BC 53 527 - -
Gso8g2399 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 306 495 IPR016163 GO:0016620
Gso8g2399 536 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 25 536 - -
Gso8g2399 536 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 330 341 IPR016160 GO:0016491
Gso8g2399 536 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 302 309 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2399 Gso-Chr8 40280739 40285088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2399 6 536 Aldehyde Dehydrogenase Gene Family AT3G48000 77.715 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2399 K00128 - gmx:100811891 1044.65