Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2386 ATGCAAAACATGTCTCTCTGTGCTTCACTCTCCTCCACAGCTTCACACATCACTTCCCTTGCCTCCGTCTCTTCTTCCACCTCTCCACTTTCCCGCAAATTTTCTCTCACTTTCCGGGAAAAAAACAGAACCCCTATTGTACCACCTCACAAGCTCCCCTTCTTCTCAGCAAGGCCTGCCCCCACCAGAGTAGTGTTGGTGAAGTCTCAGGCCACAGCACCTGCTTCTTCTGAGGCTGTGAAGGTGACACCGGTGCCTTCTGAGATGAAGGCATGGGTGTATGGAGAATATGGGGGTGTGGATGTTCTGAAGCTGGACTCCAATGTTGCTGTGCCTGATGTGAAGGAGGATCAGGTGTTAATCAAAGTTGTTGCTGCTGCTCTTAACCCTGTTGATGCCAAGAGGAGGCAGGGAAAGTTTAAAGCCACTGATTCTCCTCTTCCGACTGTTCCGGGCTATGATGTTGCGGGTGTGGTGGTGAAAGTTGGTAGTCAAGTGAAGGACTTTAAAGTGGGTGATGAAGTGTATGGAGATGTAAATGAGAAAGCACTTGAAGGTCCTAAGCAGTTCGGATCTTTGGCTGAGTACACAGCTGTTGAGGAGAAATTGTTGGCACCAAAACCGAAGAATTTGGACTTTGCTCAAGCTGCTTCTCTTCCTCTAGCAATTGAGACTGCTTATGAGGGTTTGGAGAGGACTGGATTTTCTCCTGGTAAATCTATTCTTGTTCTAAATGGTTCTGGAGGAGTTGGAAGCCTAGTGATTCAGCTAGCTAAGCAAGTTTATGGAGCTTCAAGAGTTGCTGCCACTTCAAGCACTAGAAATTTGGACCTACTGAAAAGCTTGGGAGCTGATTTGGCCATTGACTACACAAAAGAGAACTTTGAAGATTTGCCAGAAAAATTTGATGTAGTTTATGATGCCATTGGGCAATGTGACAGGGCAGTGAAGGCTGTGAAAGAAGACGGCAGTGTGGTGGCACTCACAGGTGCTGTTACACCACCTGGCTTCAGATTTGTAGTTACTTCCAATGGAGAAGTTCTGAGGAAACTAAACCCTTACTTAGAAAGTGGGAAGGTGAAGCCAATTGTTGACCCCAAAGGTCCATTCCCCTTTGATAAGCTTGCTGAAGCCTTCTCTTACCTTGAAACAAACCGAGCAACTGGAAAGGTTGTTATACATCCCATCCCTTGA 1194 0.4665 MQNMSLCASLSSTASHITSLASVSSSTSPLSRKFSLTFREKNRTPIVPPHKLPFFSARPAPTRVVLVKSQATAPASSEAVKVTPVPSEMKAWVYGEYGGVDVLKLDSNVAVPDVKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSQVKDFKVGDEVYGDVNEKALEGPKQFGSLAEYTAVEEKLLAPKPKNLDFAQAASLPLAIETAYEGLERTGFSPGKSILVLNGSGGVGSLVIQLAKQVYGASRVAATSSTRNLDLLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAVKEDGSVVALTGAVTPPGFRFVVTSNGEVLRKLNPYLESGKVKPIVDPKGPFPFDKLAEAFSYLETNRATGKVVIHPIP* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2386 397 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 44 397 IPR044626 GO:0016628
Gso8g2386 397 Gene3D - 230 344 - -
Gso8g2386 397 CDD MDR_like_2 89 393 - -
Gso8g2386 397 Gene3D - 96 393 - -
Gso8g2386 397 Pfam Alcohol dehydrogenase GroES-like domain 117 179 IPR013154 -
Gso8g2386 397 Pfam Zinc-binding dehydrogenase 282 393 - -
Gso8g2386 397 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 211 336 IPR036291 -
Gso8g2386 397 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 44 397 - -
Gso8g2386 397 SUPERFAMILY GroES-like 86 243 IPR011032 -
Gso8g2386 397 SMART PKS_ER_names_mod 98 393 IPR020843 GO:0016491
Gso8g2386 397 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 238 259 IPR002364 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2386 Gso-Chr8 40073702 40077373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2386 117 340 Monolignol Biosynthesis Gene Families AT3G19450 23.735 5.28e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2386 K18980 - gmx:100810816 727.243