Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2371 ATGTCAACACTGAACCACCTCTTTGATCTTCCAGAACAGATATGCTACGTACAATGTGGATTCTGTACAACAATACTAATGGTGAGTGTTCCATGCAGCATTTTGTCAACGGTGGTGACAGTGAGATGCGGCCACTGCACAAGCCTCCTCTCAGTCAACATGAAGAAAGCTTCCTTTGTCCCTTTCCACCTTCTTGCTTCCCTTACTCATCTTGAGCCAAAAGAAGGTGCTTCAGATGATGGTGCAAACAAGAGTTTGAACAGCTATAATAATGCATCCATAATAACCACCAATTCGGACTGTGAGGAAGAGAACGTGACTCAAATTTCCAATGTCGTGCATAAACCTCCAGAGAAGAGACAGAGAACACCATCTGCATATAACCGCTTCATCAAAGAAGAGATTAAAAGGCTTAAGTCTGAAAACCCTAACATGGCCCACAAGGAGGCTTTCAGTACTGCGGCAAAAAATTGGGCCAATTTTCCCCCATCACAGTGTGATGGAGAAGCCGACAGCTGTAACGGGACAGAGCAACTTGGGGATCTGGACTCCCATGAAGAGCCTCGTGATGCTATTGAGGTTCATAAAGAAGGCCAAGGTTTCCGTGGAAGAAAGGCTCCAAGGAATTCTATCTGGGAAAGGGCACCTTTTGAATGA 657 0.4521 MSTLNHLFDLPEQICYVQCGFCTTILMVSVPCSILSTVVTVRCGHCTSLLSVNMKKASFVPFHLLASLTHLEPKEGASDDGANKSLNSYNNASIITTNSDCEEENVTQISNVVHKPPEKRQRTPSAYNRFIKEEIKRLKSENPNMAHKEAFSTAAKNWANFPPSQCDGEADSCNGTEQLGDLDSHEEPRDAIEVHKEGQGFRGRKAPRNSIWERAPFE* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2371 218 MobiDBLite consensus disorder prediction 167 218 - -
Gso8g2371 218 Pfam YABBY protein 11 164 IPR006780 GO:0007275
Gso8g2371 218 Gene3D High mobility group box domain 112 216 IPR036910 -
Gso8g2371 218 MobiDBLite consensus disorder prediction 180 211 - -
Gso8g2371 218 PANTHER AXIAL REGULATOR YABBY 4 1 178 - -
Gso8g2371 218 PANTHER PROTEIN YABBY 6-RELATED 1 178 IPR006780 GO:0007275
Gso8g2371 218 SUPERFAMILY HMG-box 110 165 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2371 Gso-Chr8 39811245 39814658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2371 2 218 C2C2-YABBY Transcription Factor Family AT1G23420 57.709 3.48e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Gso8g2371 YABBY 6.8e-62 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2371 K25796 - gmx:100803001 453.366