Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2356 ATGGATATAGAACTCCCTGCTGCAACTGCCAATGAATCACAACAACAAAAGTTTGCTCTACCTGTGGATTCTGAAAACAAGGCCACTGTGTTCAGATTATTTTCCTTAGCCAATCCCCACATGAGAGCTTTTCACCTATCATGGGTCTCTTTCTTTGCATGCTTCGTGTCTAGCTTTGCTGCACCACCCCTTCTCCCCATAATCCGCGACAACCTCAACCTCACAGCCACTGACATTGGAAACGCCGGCGTGGCGTCGGTCTCAGGAGCCGTCTTGGCAAGAATTGCGATGGGAACAGCCTGTGACTTGGTCGGACCGCGCCTGGCCTCTGCATCATTAATTCTCCTCACAGCACCGTTTGTGTACTTCACATCCATCATCAACTCTTCCACCTCTTACCTTCTAGTTCGGTTCTTCACCGGCTTCTCGCTGGCCACATTTGTATCTACCCAGTTCTGGATGAGCTCCATGTTCTCTGCTCCGGTGGTTGGTTCAGCCAACGGATTCTCTGGTGGATGGGGAAACCTTGGAGGAGGGGCTACCCAGCTCATCATGCCTCTAGTATTCTCCCTCATCCGCGACATTGGCGCTTCCAAATTCACTGCGTGGAGGATCGCATTCTTTGTCCCTGCCATGTTCCAAATGCTAACAGCATTCTCCATCCTCTTATTTGGTCAGGACATGCCCGATGGGAACTTCCACCGCTTGAAGAAGTCAGGGGAAAAAGCCAAAGATGATTTCTCTAGAGTTTTGTTTCATGGTGTTACTAACTATAGGGGATGGATTCTAGGGTTGACTTATGGATACTGCTTTGGGGTGGAGTTGACCATAGACAACATCATTGCTGAGTACTTCTATGATAGGTTTAATCTCAAACTCCACACTGCTGGAATCATTGCTGCAAGCTTTGGCTTGGCTAACTTTTTTTCTAGGCCTGGTGGGGGTTATATATCTGATGTAATGGCTAAGAGGTTTGGCATGAGGGGAAGATTGTGGGCTTTATGGATATGCCAAACCTTGGCTGGTGTTTTCTGCATAATTCTTGGCCTGGTGGGATCTTTAAGTGTATCCATTGTTGTTATGATCATATTCTCTGTGTTCGTCCAAGCCGCGTGTGGAATGACCTTTGGGATTGTTCCTTTTGTCTCAAGAAGGTCATTAGGAGTTATATCTGGAATGACAGGAGGAGGAGGCAACGTGGGAGCAGTTGTCACCCAACTAATTTTCTTCAAAGGATCCAGATTTTCAAAAGAAAGAGGAATCACTCTAATGGGAGCCATGATCATAATATGCAGCCTGCCAATATGCTTAATCTACTTTCCCCAATGGGGTGGCATGTTCTCTGGTCCTTCATCTAAAAAGGTCACAGAGGAAGATTACTACTTGGCTGAGTGGAACTCAAAGGAGAAGGAGAAAGGCTCCCATCATGCAAGCTTGAAATTTGCTGATAATAGCAGAAGTGAAAGAGGCAGAAAGCTGAATGCTTCAACCGAGCTTACCGAGGAAATCACACCCCCACATGTTTGA 1527 0.4682 MDIELPAATANESQQQKFALPVDSENKATVFRLFSLANPHMRAFHLSWVSFFACFVSSFAAPPLLPIIRDNLNLTATDIGNAGVASVSGAVLARIAMGTACDLVGPRLASASLILLTAPFVYFTSIINSSTSYLLVRFFTGFSLATFVSTQFWMSSMFSAPVVGSANGFSGGWGNLGGGATQLIMPLVFSLIRDIGASKFTAWRIAFFVPAMFQMLTAFSILLFGQDMPDGNFHRLKKSGEKAKDDFSRVLFHGVTNYRGWILGLTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAASFGLANFFSRPGGGYISDVMAKRFGMRGRLWALWICQTLAGVFCIILGLVGSLSVSIVVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNVGAVVTQLIFFKGSRFSKERGITLMGAMIIICSLPICLIYFPQWGGMFSGPSSKKVTEEDYYLAEWNSKEKEKGSHHASLKFADNSRSERGRKLNASTELTEEITPPHV* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2356 508 Gene3D MFS general substrate transporter like domains 37 233 IPR036259 -
Gso8g2356 508 MobiDBLite consensus disorder prediction 468 496 - -
Gso8g2356 508 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 444 IPR020846 GO:0022857
Gso8g2356 508 Pfam Major Facilitator Superfamily 48 404 IPR011701 GO:0022857|GO:0055085
Gso8g2356 508 CDD MFS_NRT2_like 44 437 IPR044772 GO:0015112
Gso8g2356 508 Gene3D MFS general substrate transporter like domains 242 444 IPR036259 -
Gso8g2356 508 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 3 494 IPR044772 GO:0015112
Gso8g2356 508 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 3 494 - -
Gso8g2356 508 MobiDBLite consensus disorder prediction 468 508 - -
Gso8g2356 508 SUPERFAMILY MFS general substrate transporter 38 441 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2356 Gso-Chr8 39496092 39499456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2356 16 491 Inorganic Solute Cotransporters AT1G12940 76.261 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2356 K02575 - gmx:100803196 945.266