Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2338 ATGGTGGGCCCCTCTCCCTCCCATGGCAACAACCTCAAATTCCTCTGCAGCTACGGCGGCAAAATCCTCCCCCGTTTTCCCGACAGCAAGCTCCGTTACTTTGGCGGCCACACCCGCGTCCTCGCCCTCCCTCGCTCCGCTCCCTTCTCCGAGGTTATGGTGAAGTTGGAAGAACTATGCGGCGCACACGTCACCCACCTCCGTTGCCAGTTACCAACCGAAGACCTCGACGCGTTGGTTTCCATCACGTGCGACGAGGACCTCAATAATCTCGTGGAAGAATACGACGGTGCCGTTTCATCTTTGAAAATCAGAGCCTTCCTTTGCTCTTCGCCTGCTCCGTCAAAATCTTCGTCGACAACGTCGTCGTCGTGCTCATCTTCTTCGTCGTCTCCGTCGTCTTGCTGCCGTACCGCTATGGCAGCGCCGCCGCAGTTGGCGAAGAAGTCTTATGTTTCTCTTTCCTCTCCCCGCTACTATAGTCATCCCCGCGTTCAGGGGAACCGTGGCGTCGTTTACCTCGTCCCCAGCGGCAACCACTGGCACTAG 549 0.5756 MVGPSPSHGNNLKFLCSYGGKILPRFPDSKLRYFGGHTRVLALPRSAPFSEVMVKLEELCGAHVTHLRCQLPTEDLDALVSITCDEDLNNLVEEYDGAVSSLKIRAFLCSSPAPSKSSSTTSSSCSSSSSSPSSCCRTAMAAPPQLAKKSYVSLSSPRYYSHPRVQGNRGVVYLVPSGNHWH* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2338 182 Gene3D - 30 111 - -
Gso8g2338 182 SUPERFAMILY CAD & PB1 domains 28 117 - -
Gso8g2338 182 SMART PB1_new 26 107 IPR000270 GO:0005515
Gso8g2338 182 Pfam PB1 domain 28 107 IPR000270 GO:0005515
Gso8g2338 182 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 5 175 - -
Gso8g2338 182 CDD PB1_UP2 15 108 - -
Gso8g2338 182 PANTHER OS05G0427100 PROTEIN-RELATED 5 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2338 Gso-Chr8 39075381 39077330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2338 10 111 MAP Kinase Kinase Kinase AT2G35050 50.000 9.69e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2338 - - gmx:100786933 332.413