Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2322 ATGTGCATAAAGTTTTCTTCTTTCAATCCATCTATTGAAGCACTAGTTTCACAAGATGAATCTCCTTCATTGGACCACAAAAATCTTAACTTTAACAATCAGTATCTGATTAAGGACAATCATCATGGATCGGAACATTTGTTGGATTTTTCTGTACAGAGCGATGAAACTGTTTTGGGTTTGGTTGGGAGGGAGAAGGAAAATTTGCCCCAAGATGGTTACCTCAAGAGACTTCTTAGTGGGGACTTGGACTTGAGTGTTAGGAAGGAGGCTCTTGATTGGATTTGGAAGGCTCATGCATACTTTGACTTTGGACCCTGTAGCTTATGTCTATCTGTTAACTACTTGGATCGGTTCCTATCAGTATATGAATTACCAAGAGGCAAAAGTTGGAGTATGCAACTGTTAGCTGTAGCATGTTTGTCAATTGCTGCCAAAATGGAGGAGATTAAAGTGCCTCCTTGTGTAGATTTACAGTTTGCATTTGAAGCTAAAGACATTCAAAGAATGGAACTACTGGTGTTAAGCACATTGAGATGGAAAATGCAAGCTTCAACTCCATTTTCCTTCCTAGATTACTTCCTCAGGAAGATCACTTGTGACCAAGTTATAGTAAAGTCATCCATTTTAAGATCAGTAGGACCCATCCTTAACATAATTAAATGTATCAATTTCTTGGAATTCAGGCCCTCTGAAATTGCTGCAGCAGTGGCAATTTCTGTATCAAGGGAAATGCAAGCAGAAGAGATTGACAAGACCTTAACATGTTTTTTCATTGTAGGGAAGGAAAGAATTTTGAAGTGTCTTGAATTGATCAAAGATTTGTCCTTGATCCAAGATTCTGCTAACTTAGGCACCAACTTAGCATCATTTGTACCCCAAAGCCCTATTGGGGTGCTGGATGCTGCATGCTTGAGCTCTATAAGTGATGAATTAACAGTTGGATCATATACAGATTCATCCCTTAATACTCCAAATTCTAAGAGGAGGAGGAAATCTGACTAA 1005 0.3871 MCIKFSSFNPSIEALVSQDESPSLDHKNLNFNNQYLIKDNHHGSEHLLDFSVQSDETVLGLVGREKENLPQDGYLKRLLSGDLDLSVRKEALDWIWKAHAYFDFGPCSLCLSVNYLDRFLSVYELPRGKSWSMQLLAVACLSIAAKMEEIKVPPCVDLQFAFEAKDIQRMELLVLSTLRWKMQASTPFSFLDYFLRKITCDQVIVKSSILRSVGPILNIIKCINFLEFRPSEIAAAVAISVSREMQAEEIDKTLTCFFIVGKERILKCLELIKDLSLIQDSANLGTNLASFVPQSPIGVLDAACLSSISDELTVGSYTDSSLNTPNSKRRRKSD* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2322 334 SMART Cyclin_C_2 185 308 IPR004367 -
Gso8g2322 334 SMART cyclin_7 93 176 IPR013763 -
Gso8g2322 334 SUPERFAMILY Cyclin-like 46 182 IPR036915 -
Gso8g2322 334 CDD CYCLIN 88 175 IPR013763 -
Gso8g2322 334 Gene3D - 71 183 - -
Gso8g2322 334 Gene3D - 62 270 - -
Gso8g2322 334 ProSitePatterns Cyclins signature. 88 119 IPR006671 -
Gso8g2322 334 Pfam Cyclin, C-terminal domain 186 276 IPR004367 -
Gso8g2322 334 PANTHER CYCLIN-D4-1-LIKE 49 331 - -
Gso8g2322 334 Pfam Cyclin, N-terminal domain 64 182 IPR006671 -
Gso8g2322 334 PANTHER CYCLINS 49 331 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2322 Gso-Chr8 38533301 38536006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2322 29 318 Core Cell Cycle Gene Families AT2G22490 48.397 8.49e-78 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2322 K18810 - gmx:100779104 653.284