Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2307 ATGGAGAGATTAGAGAGGAGGAGCAAGAAGGAGGAAGTGAAAGAAAAGAAAAAGAGCCGAAAGTTTGAGTTAACGTTGATGTTGGGTGGCCAGAACCAAAAGAAAGAGGTGGTTGACGACGACGACGTATCGGTATCGCCGAGGGATGTGTTTGGGGTTCCTATTTTAGGGATGGATTCAGATAGCACGGGGAGCAGCAACTACGGCGGGCCGGGGTCGCCAGGCCTTGGCCAGAAGCATAGCCAGCAGTGGAGGGCGATGATCGATGTTTTGAGGTTCAAGTCCGTTAGGAGATTCTCAACGATCCCGTTGCTTGCAGCGAGCTACGAGATCTCGAGGAAGAGCCTAAGGAACAAGCTGGCGCGTATTCTACCCGCGAATGAAGAAGACGATGATTTGAATCTTGGAATTGACATTGATGACATTTCCACCAAGCCTTCTTGGAGGAACTTCAGTTATGCTGACCTTGCCGCTGCCACAGACGATTTCAGCCCTGTGAACTTGCTTGGAAAAGGTGGTCATGCTGAAGTCTACAAAGGATGCTTAGCAGATGGTCAAGTCGTAGCCGTAAAGAGGCTAATGAGGAATGAAAAAGAAATTGAGGGCAAAGCTGGTGATTTCTTGACAGAGCTTGGAATCATCGCTCACATTAACCATCCCAATGCAACACGCTTGATTGGGTTTGGGATCGACAATGGTCTCTACTTTGTTCTACAATTGGCCCCACATGGCAGCCTTTCCTCTTTGCTCTTTGGTTCTGAATGTTTAGAGTGGAAGATAAGGTTTAAAGTAGCTGTTGGGGTGGCAAAAGGGTTGCAGTATCTCCACCACGATTGCCCAAGAAGAATCATTCACAGAGACATCAAAGCCTCAAATATTTTACTCAACCAAAATAATGAAGCTGAGATTTCAGATTTTGGATTGGCAAAGTGGCTCCCAGATAAGTGGGCCCACCATGTTGTCTTCCCAATTGAAGGCACATTTGGGTATTTGGCTCCAGAATACTTTATGCATGGAATTGTGGATGAGAAAACTGATGTTTTTGCATTTGGGGTTTTGTTACTGGAACTCATAACAGGTCGTCGTGCAGTTGATTCAAATAGTAGGGAAAGTCTTGTGATCTGGGCCAAACCCCTGCTGGAAGCAAAGTTGATCGAACAAATGGTAGACCCCAGATTAGAACTGAAATATGATCTGGCAGAAATGAAGTGTGCCATGGTAACGGCTTCCATGTGTATCCATCACATGTCCTCTAAGCGACCATACATGAATCAGGTTGTGCAGTTACTGAAAGGGGAAGAGGTGCCTATTGAACTCACACAAAATTCATCAGCTCCAAGATCACACTTGATAGATGCATGTGACTTGGAAGATTATACTTGCTCTAATTATTTGACTGACCTCAATCGCCACAAGCAATTACTCATGGAGTGA 1434 0.4561 MERLERRSKKEEVKEKKKSRKFELTLMLGGQNQKKEVVDDDDVSVSPRDVFGVPILGMDSDSTGSSNYGGPGSPGLGQKHSQQWRAMIDVLRFKSVRRFSTIPLLAASYEISRKSLRNKLARILPANEEDDDLNLGIDIDDISTKPSWRNFSYADLAAATDDFSPVNLLGKGGHAEVYKGCLADGQVVAVKRLMRNEKEIEGKAGDFLTELGIIAHINHPNATRLIGFGIDNGLYFVLQLAPHGSLSSLLFGSECLEWKIRFKVAVGVAKGLQYLHHDCPRRIIHRDIKASNILLNQNNEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSNSRESLVIWAKPLLEAKLIEQMVDPRLELKYDLAEMKCAMVTASMCIHHMSSKRPYMNQVVQLLKGEEVPIELTQNSSAPRSHLIDACDLEDYTCSNYLTDLNRHKQLLME* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2307 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 283 295 IPR008271 GO:0004672|GO:0006468
Gso8g2307 477 MobiDBLite consensus disorder prediction 56 79 - -
Gso8g2307 477 MobiDBLite consensus disorder prediction 1 20 - -
Gso8g2307 477 Coils Coil 1 21 - -
Gso8g2307 477 SUPERFAMILY Protein kinase-like (PK-like) 146 439 IPR011009 -
Gso8g2307 477 Gene3D Transferase(Phosphotransferase) domain 1 242 445 - -
Gso8g2307 477 ProSitePatterns Protein kinases ATP-binding region signature. 169 191 IPR017441 GO:0005524
Gso8g2307 477 Pfam Protein kinase domain 166 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2307 477 PANTHER OS08G0249100 PROTEIN 1 477 - -
Gso8g2307 477 ProSiteProfiles Protein kinase domain profile. 163 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2307 477 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 1 477 - -
Gso8g2307 477 MobiDBLite consensus disorder prediction 59 79 - -
Gso8g2307 477 SMART serkin_6 163 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2307 477 Gene3D Phosphorylase Kinase; domain 1 137 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2307 Gso-Chr8 38065110 38070230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2307 142 453 Trihelix Transcription Factor Family AT5G38560 42.154 1.94e-68 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gso8g2307 Pkinase 8.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2307 - - gmx:100812793 902.123