Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2290 ATGGAGACTCAAAATCAATCAGATCCTGCAGGATTAAAAAGGATGCTTCCTCCACCGCCTGGAAGTTTCCAAGACCGTGAAGACCTTATTAAACATGTTCGTGATTTCGGAGCTAATCAAGGATATGTTGTCACCATCAAGAAGTCCAGAAAGGATAGAAGAGTCATCCTTGGCTGTGACAGAGGAGGTGTCTATCGTAATAGACGAAAAATTGATGAAAGTAAGCGCAAAAGGAAAGCAACTTCACGCCTTATAAACTGTCCTTTTGAAGCCATAGGTAAAAAGGAAGATGATGCATGGGTACTTACTGTAAAAAATGGAGATCACAATCATGAACCGTTGAAAGACATGTCAGAACATCCTTATAGTCGACGTTTCACTGAGGAAGAAGTTAGACAAATCAAACAAATGACTGAAGCTGGTATAAAACCTCGTCAAGTGCTTAAAGCTCTCAAGCATAGTAATCCTGAATTGCAGTCAACACCAAGGCATTTGTACAACCTCAAAGCAAAGATTCGTCAGGGAAATCTATCAGAGAAAACATTTAAGTCATGGAGACCAAATAGATCTATCCATGTTGAGATAAACAGTAATTCATCTGATGGTTCATTAAACCGAAACTATCAGCTGCTGAAGGTCTCAAATTTTATTGGGGGGAAATTTGTAGATTCTCAGGGTTCTGTAATCATTGATGTTATAAATCCCGCAACGCAAGAAGTTGTATCTCAAGTTCATTTAACTATATATGAAGAGTTTAAAGCTGCAGTTAGTGCAGCCAAGCAAGCTTTTCCTTCATGGAAAAATACTCCTATCACCACTCGTCAACGCATTATGTTTAAACTTCAGGAGCTTATCCGCAGAGATATTGATAAGCTTGCCATGAACATCACCATAGAACAGGGCAAGACATTAAAAGGTGCAAAAAGAGATGTGCTTTATGGTTTAGAAGTGGTGGAGCATGTTTGTGGGATGGCAAACCTGCAAATGGGGGAATTTGTCCCCAATGCCTACAATGGGATTGATACGTACTGCATTAGAGAGCCCCTTGGAGTTTGTGCTGGAATATGTGCCTTTAACTTTCCAGCAACGATACCATTGTGGATGTTCCCTATTGCAATTACATGTGGCAACACTTATATTCTTAAGCCATGTGAGAAAAATCCAGGGGTTTCAACGATACTTGCAGCACTAGCAAAAGAAGCTGGTTTGCCAGATGGTGTATTAAATATTGTTCATGGTACCCATGATATTGTTAATTACATATGCAATGATGAAGATATAAAAGCTGTATCGTTTGTTGGTCCAATTACAGCTGGAATATATGCCACAGCTTCTGCTAGAGGGAAACGAGTTCAGTCAAATGCAGGTGGCACAAATCATGTACTTGTAATGCCCGATGCTGGCTTGGATGCGACTTTAGATGCCCTTGTTCCTGCTGGCTTTGGTGCTGCAGGAGAGAGGTGCATGACTTCAAGCATAGCTATTTTTGTTGGAGGTTCAATGCAATGGGAGGAAAAACTAGTGCAGCGTGCCAAACTACTTAGAGTAAATGCAGGAACAAATCCTAGTGCAGACATTGGTCCAGTTATTAGCAAAGAGGCAAAGGAGAGGATATGTAGACTAGTTCAGAGCAGTGTTGAAAATGGGGCTAGACTTCTACTTGATGGAAGAGATATTGTGGTACCGGGATATGAAAATGGGAACTTTGTTGGTCCTACTATCTTATGTGATGTTACAACCTGCATGGAATGTTACAAGGAAGAAAGTTTTGGACCAGTTCTGCTTTGCATGCAGGCCGACAACATAGATGGGGCTATGTCAATAATAAATAAAAACAGATATAGAAATGGAGCTTCTATATTCACCACATCTGGTATAGCTGCTAGGAGGTTCCAGAATGAAGTTGAGGCAGGACTGGTTGGGATCAATGTGCCAGTACCTGTTCCATTACCGTTTTCCTCCAATGGGTCAAAATCATCATTTGCTGGTGATAGTTTTTCTGGAAAAGCTGGAGTACAGTTTTATACCCAAATCAAAACAGTGGTTCACCAATGGAAGGATTTCCCTAGACAAGCACTATTCCCTGCTACATGTCCATCTGAGAGAGATTCACCTAGGCAATTGTCACAAGCCATGCCTGTAGAATCTGAAAGTGATTCACCAACCTATGAAGTACAAGTGGCCATCACTGATGTGGATATACCGAACACAACCATGTCATCTGCATCTACATCAACTGATAAGGATCACAGAAGCCAGGATGTTTCCCTATTGCTGCCTTCAGCATCTGAGAGGGATATGTCAGATCGGGATATTTCACTGGTATTATCACCTGCATTGCAAAGCAATTTACCTAGCCAAGGAGTATCTGTTGCCACATCACAGTCATCAGAGAGGATGTATGTCTCTGAAACATCTCAGTGGAATGAAAATTCGCCAGCAACATCAAAAAGAAGTGAAATTATTCTACCAACTTCAGAGAGGAGTCTTGTGTCTGCATCTCAGATGAATGGAAACTTATTTATCCCCCATACGACTGATACTGCTACAGCTTTGAAACCAGAGGGGATATACATGTGTACGTCACATAAAACTGATAGCATTGCTCAAGCATCACAAGAGAGTAGTGATAACATCACTCCAGGGTCTCATAGAATGGATACTACTGTGCATTCAAACTCTGACAAGGCATACATACTGGCAGCATCTCATTTGAATAAAAGTGTTGGTCAAACATTTGAAAGAACAGACCCTATGTTTCCAACTTCTGAGAGAATATACATGCCTTCAACGTCATCGCACATGAATGACCAAATTGGCTCAACATCTCAAAGGACTGATATTCCAACTACAGAGAGAATTTATATCCCTGCAGCATCTCATATAAATAAAAGCATTAGTCCAGCTTGTCAGCTTGATGATGATACTTTGGCTCCTACTTCTGAGAGGGTCTTTATGCCTCCTATAGTACCAGAATATACCACCAACTTCAGAGAGGTTATATATTCCTAA 3012 0.4084 METQNQSDPAGLKRMLPPPPGSFQDREDLIKHVRDFGANQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESKRKRKATSRLINCPFEAIGKKEDDAWVLTVKNGDHNHEPLKDMSEHPYSRRFTEEEVRQIKQMTEAGIKPRQVLKALKHSNPELQSTPRHLYNLKAKIRQGNLSEKTFKSWRPNRSIHVEINSNSSDGSLNRNYQLLKVSNFIGGKFVDSQGSVIIDVINPATQEVVSQVHLTIYEEFKAAVSAAKQAFPSWKNTPITTRQRIMFKLQELIRRDIDKLAMNITIEQGKTLKGAKRDVLYGLEVVEHVCGMANLQMGEFVPNAYNGIDTYCIREPLGVCAGICAFNFPATIPLWMFPIAITCGNTYILKPCEKNPGVSTILAALAKEAGLPDGVLNIVHGTHDIVNYICNDEDIKAVSFVGPITAGIYATASARGKRVQSNAGGTNHVLVMPDAGLDATLDALVPAGFGAAGERCMTSSIAIFVGGSMQWEEKLVQRAKLLRVNAGTNPSADIGPVISKEAKERICRLVQSSVENGARLLLDGRDIVVPGYENGNFVGPTILCDVTTCMECYKEESFGPVLLCMQADNIDGAMSIINKNRYRNGASIFTTSGIAARRFQNEVEAGLVGINVPVPVPLPFSSNGSKSSFAGDSFSGKAGVQFYTQIKTVVHQWKDFPRQALFPATCPSERDSPRQLSQAMPVESESDSPTYEVQVAITDVDIPNTTMSSASTSTDKDHRSQDVSLLLPSASERDMSDRDISLVLSPALQSNLPSQGVSVATSQSSERMYVSETSQWNENSPATSKRSEIILPTSERSLVSASQMNGNLFIPHTTDTATALKPEGIYMCTSHKTDSIAQASQESSDNITPGSHRMDTTVHSNSDKAYILAASHLNKSVGQTFERTDPMFPTSERIYMPSTSSHMNDQIGSTSQRTDIPTTERIYIPAASHINKSISPACQLDDDTLAPTSERVFMPPIVPEYTTNFREVIYS* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2290 1003 MobiDBLite consensus disorder prediction 1 24 - -
Gso8g2290 1003 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 822 IPR010061 GO:0004491
Gso8g2290 1003 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 232 663 IPR016162 GO:0016491
Gso8g2290 1003 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 213 685 IPR010061 GO:0004491
Gso8g2290 1003 CDD ALDH_F6_MMSDH 213 685 IPR010061 GO:0004491
Gso8g2290 1003 Pfam Aldehyde dehydrogenase family 221 681 IPR015590 GO:0016491
Gso8g2290 1003 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 1 822 - -
Gso8g2290 1003 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 456 655 IPR016163 GO:0016620
Gso8g2290 1003 MobiDBLite consensus disorder prediction 702 746 - -
Gso8g2290 1003 MobiDBLite consensus disorder prediction 696 754 - -
Gso8g2290 1003 SUPERFAMILY ALDH-like 207 687 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2290 Gso-Chr8 37271637 37301090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2290 212 686 Aldehyde Dehydrogenase Gene Family AT2G14170 70.084 0.0 680